STRINGSTRING
Ctsb Ctsb I79_000449 I79_000449 Slc34a1 Slc34a1 Thrb Thrb Med1 Med1 Ghsr Ghsr Lmo2 Lmo2 Gba Gba I79_008803 I79_008803 I79_009151 I79_009151 Stk11 Stk11 Rdx Rdx Gclc Gclc I79_011076 I79_011076 Tomm70 Tomm70 Gata1 Gata1 Gas2l1 Gas2l1 Rasl10a Rasl10a I79_015503 I79_015503 Ppargc1a Ppargc1a I79_016917 I79_016917 I79_022778 I79_022778 I79_023473 I79_023473 I79_023814 I79_023814 Kit Kit nat nat
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CtsbCathepsin B; Belongs to the peptidase C1 family. (339 aa)
I79_000449Cardiolipin synthetase. (233 aa)
Slc34a1Sodium-dependent phosphate transport protein 2A. (629 aa)
ThrbThyroid hormone receptor beta. (377 aa)
Med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1581 aa)
GhsrGrowth hormone secretagogue receptor type 1; Belongs to the G-protein coupled receptor 1 family. (364 aa)
Lmo2Rhombotin-2. (151 aa)
GbaGlucosylceramidase. (515 aa)
I79_008803Prestin; Motor protein that converts auditory stimuli to length changes in outer hair cells and mediates sound amplification in the mammalian hearing organ; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (557 aa)
I79_009151Bromodomain-containing protein 8. (1040 aa)
Stk11Serine/threonine-protein kinase 11. (505 aa)
RdxRadixin. (583 aa)
GclcGlutamate--cysteine ligase catalytic subunit. (584 aa)
I79_011076Coagulation factor X. (629 aa)
Tomm70Mitochondrial import receptor subunit TOM70. (384 aa)
Gata1Erythroid transcription factor-like protein. (330 aa)
Gas2l1GAS2-like protein 1. (697 aa)
Rasl10aRas-like protein family member 10A. (232 aa)
I79_015503Transcription factor HES-1. (92 aa)
Ppargc1aPeroxisome proliferator-activated receptor gamma coactivator 1-alpha. (894 aa)
I79_016917Sodium/potassium-transporting ATPase subunit alpha-3; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (632 aa)
I79_022778Glutamate--cysteine ligase regulatory subunit. (225 aa)
I79_023473Calcium-binding protein 39. (296 aa)
I79_023814Arylamine N-acetyltransferase 1; Belongs to the arylamine N-acetyltransferase family. (290 aa)
KitMast/stem cell growth factor receptor. (452 aa)
natArylamine N-acetyltransferase 2; Belongs to the arylamine N-acetyltransferase family. (290 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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