(72 nodes) Regulation of cilium assembly network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cep120	Centrosomal protein of 120 kDa. (989 aa)
	I79_011286	Microtubule-associated protein. (1300 aa)
	Hap1	Huntingtin-associated protein 1. (602 aa)
	Tesk1	Dual specificity testis-specific protein kinase 1. (518 aa)
	Pqbp1	Polyglutamine-binding protein 1. (265 aa)
	Mark4	MAP/microtubule affinity-regulating kinase 4. (149 aa)
	Evi5l	EVI5-like protein. (810 aa)
	Cep97	Centrosomal protein of 97 kDa. (868 aa)
	I79_013931	Serine/threonine-protein kinase MAK. (143 aa)
	I79_013929	Serine/threonine-protein kinase MAK. (349 aa)
	I79_013982	Oxygen-regulated protein 1. (657 aa)
	Atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (147 aa)
	I79_015386	Mitogen-activated protein kinase 15. (635 aa)
	I79_015544	Meckelin. (749 aa)
	I79_015961	Serologically defined colon cancer antigen 8. (184 aa)
	Atmin	ATM interactor. (664 aa)
	I79_017136	Protein FAM154A. (475 aa)
	Limk2	LIM domain kinase 2. (540 aa)
	I79_017426	LIM domain kinase 2. (121 aa)
	Mphosph9	M-phase phosphoprotein 9. (1141 aa)
	Entr1	Serologically defined colon cancer antigen 3-like. (89 aa)
	Fuz	Protein fuzzy-like. (365 aa)
	I79_019293	Protein fuzzy-like. (60 aa)
	Tapt1	Transmembrane anterior posterior transformation protein 1. (243 aa)
	Rabep2	Rab GTPase-binding effector protein 2. (557 aa)
	I79_019709	Kinesin-like protein KIF24; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1107 aa)
	Tbc1d30	TBC1 domain family member 30. (787 aa)
	I79_020157	Cyclin-dependent kinase-like 1; Belongs to the protein kinase superfamily. (352 aa)
	I79_020566	Doublecortin domain-containing protein 2. (191 aa)
	I79_020760	Geminin. (287 aa)
	Saxo2	Protein FAM154B. (244 aa)
	Odf2l	Outer dense fiber protein 2-like. (632 aa)
	Crocc	Rootletin. (1696 aa)
	I79_022625	Centrosomal protein of 135 kDa. (821 aa)
	Arhgap35	Glucocorticoid receptor DNA-binding factor 1. (1499 aa)
	I79_023253	ATM interactor. (56 aa)
	I79_023284	Protein FAM154A. (409 aa)
	Kctd17	BTB/POZ domain-containing protein KCTD17. (243 aa)
	I79_024878	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (110 aa)
	I79_025378	WD repeat-containing protein 8. (126 aa)
	Gdi2	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (445 aa)
	Mns1	Meiosis-specific nuclear structural protein 1. (489 aa)
	Cdk10	Cell division protein kinase 10; Belongs to the protein kinase superfamily. (360 aa)
	I79_000637	Tctex1 domain-containing protein 2. (161 aa)
	Ift20	Intraflagellar transport protein 20-like. (132 aa)
	Syne1	Nesprin-1. (1959 aa)
	I79_001170	Nesprin-1. (1360 aa)
	I79_001171	Nesprin-1. (1173 aa)
	I79_001484	65 kDa Yes-associated protein. (257 aa)
	Htt	Huntingtin protein. (2928 aa)
	I79_002729	Centrobin. (689 aa)
	Atg3	Autophagy-related protein 3. (314 aa)
	I79_003621	TBC1 domain family member 7. (332 aa)
	I79_003784	Tau-tubulin kinase 2. (1175 aa)
	Septin9	Septin-9; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (566 aa)
	I79_005306	Rootletin. (1579 aa)
	I79_005353	Nesprin-2. (903 aa)
	I79_005354	Nesprin-2. (54 aa)
	Syne2	Nesprin-2. (1667 aa)
	I79_005603	Putative ubiquitin carboxyl-terminal hydrolase CYLD. (730 aa)
	Ccdc151	Coiled-coil domain-containing protein 151. (964 aa)
	I79_005867	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (885 aa)
	I79_006693	Intraflagellar transport protein 88-like. (533 aa)
	Gsk3b	Glycogen synthase kinase-3 beta. (328 aa)
	Ift140	Intraflagellar transport protein 140-like. (1462 aa)
	Cenpj	Centromere protein J. (1341 aa)
	I79_008737	Doublecortin domain-containing protein 2. (98 aa)
	I79_008980	Bardet-Biedl syndrome 4 protein-like. (104 aa)
	Bbs4	Bardet-Biedl syndrome 4 protein-like. (125 aa)
	I79_010092	Voltage-dependent anion-selective channel protein 3. (139 aa)
	Tchp	Trichoplein keratin filament-binding protein. (167 aa)
	Ccdc88a	Girdin. (1664 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atg3	Atg5	G3H088	G3HVR2	Autophagy-related protein 3.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.999
Atg5	Atg3	G3HVR2	G3H088	Autophagy protein 5; Involved in autophagic vesicle formation.	Autophagy-related protein 3.	0.999
Atg5	Htt	G3HVR2	G3GWA8	Autophagy protein 5; Involved in autophagic vesicle formation.	Huntingtin protein.	0.620
Atg5	I79_005867	G3HVR2	G3H6B2	Autophagy protein 5; Involved in autophagic vesicle formation.	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.486
Atg5	I79_010092	G3HVR2	G3HHH5	Autophagy protein 5; Involved in autophagic vesicle formation.	Voltage-dependent anion-selective channel protein 3.	0.457
Bbs4	I79_008980	G3HEJ7	G3HEJ6	Bardet-Biedl syndrome 4 protein-like.	Bardet-Biedl syndrome 4 protein-like.	0.450
Bbs4	Ift140	G3HEJ7	G3HBX9	Bardet-Biedl syndrome 4 protein-like.	Intraflagellar transport protein 140-like.	0.770
Bbs4	Ift20	G3HEJ7	G3GTQ1	Bardet-Biedl syndrome 4 protein-like.	Intraflagellar transport protein 20-like.	0.570
Ccdc151	Mns1	G3H698	G3GRL2	Coiled-coil domain-containing protein 151.	Meiosis-specific nuclear structural protein 1.	0.573
Ccdc88a	I79_005353	G3HJT0	G3H4Y9	Girdin.	Nesprin-2.	0.639
Ccdc88a	I79_005354	G3HJT0	G3H4Z0	Girdin.	Nesprin-2.	0.639
Ccdc88a	Syne2	G3HJT0	G3H4Z1	Girdin.	Nesprin-2.	0.598
Cenpj	Cep120	G3HDH0	G3HKB4	Centromere protein J.	Centrosomal protein of 120 kDa.	0.418
Cenpj	I79_022625	G3HDH0	G3IFV1	Centromere protein J.	Centrosomal protein of 135 kDa.	0.667
Cep120	Cenpj	G3HKB4	G3HDH0	Centrosomal protein of 120 kDa.	Centromere protein J.	0.418
Cep120	I79_000637	G3HKB4	G3GSM0	Centrosomal protein of 120 kDa.	Tctex1 domain-containing protein 2.	0.408
Cep120	I79_002729	G3HKB4	G3GY59	Centrosomal protein of 120 kDa.	Centrobin.	0.566
Cep120	I79_017136	G3HKB4	G3I186	Centrosomal protein of 120 kDa.	Protein FAM154A.	0.540
Cep120	I79_022625	G3HKB4	G3IFV1	Centrosomal protein of 120 kDa.	Centrosomal protein of 135 kDa.	0.481
Cep120	I79_023284	G3HKB4	G3IHJ4	Centrosomal protein of 120 kDa.	Protein FAM154A.	0.540