(65 nodes) Negative regulation of ubiquitin-dependent protein catabolic process network (Cricetulus griseus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	Pbk	Lymphokine-activated killer T-cell-originated protein kinase. (323 aa)
	Psen1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (467 aa)
	Rpl11	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
	I79_011482	60S ribosomal protein L5. (211 aa)
	I79_011288	SWI/SNF complex subunit SMARCC1. (1411 aa)
	I79_010289	Myotubularin. (410 aa)
	Pdcl3	Phosducin-like protein 3. (241 aa)
	I79_009995	60S ribosomal protein L5-A. (178 aa)
	Tlk2	Serine/threonine-protein kinase tousled-like 2. (750 aa)
	I79_009367	60S ribosomal protein L5. (147 aa)
	Pml	Putative transcription factor PML. (540 aa)
	I79_008911	60S ribosomal protein L5. (54 aa)
	Hfe	Hereditary hemochromatosis protein-like; Belongs to the MHC class I family. (306 aa)
	Sdcbp	Syntenin-1. (298 aa)
	Gipc1	PDZ domain-containing protein GIPC1. (333 aa)
	I79_007632	60S ribosomal protein L11. (93 aa)
	Klhl40	Kelch repeat and BTB domain-containing protein 5. (621 aa)
	I79_006308	60S ribosomal protein L5. (179 aa)
	I79_006225	Sonic hedgehog protein. (226 aa)
	I79_006157	60S ribosomal protein L5. (176 aa)
	Rpl23	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	I79_005279	60S ribosomal protein L5. (176 aa)
	I79_005032	DDRGK domain-containing protein 1. (345 aa)
	Wac	WW domain-containing adapter protein with coiled-coil. (601 aa)
	Bag5	BAG family molecular chaperone regulator 5-like protein. (447 aa)
	Clec16a	Protein CLEC16A. (1048 aa)
	I79_003561	Eukaryotic translation initiation factor 3 subunit H. (294 aa)
	Map1a	Microtubule-associated protein 1A. (2585 aa)
	Pabpn1l	Embryonic polyadenylate-binding protein 2-like isoform 1. (306 aa)
	Usp7	Ubiquitin carboxyl-terminal hydrolase 7. (82 aa)
	Ccar2	Protein KIAA1967-like. (916 aa)
	Usp9x	Putative ubiquitin carboxyl-terminal hydrolase FAF-X; Belongs to the peptidase C19 family. (2558 aa)
	Rybp	RING1 and YY1-binding protein. (245 aa)
	Ubxn1	UBX domain-containing protein 1. (122 aa)
	I79_025376	60S ribosomal protein L11. (97 aa)
	I79_023040	60S ribosomal protein L5. (101 aa)
	I79_022546	Tripartite motif-containing protein 39. (214 aa)
	I79_022544	Tripartite motif-containing protein 39. (453 aa)
	I79_022343	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit. (1444 aa)
	I79_021865	60S ribosomal protein L5. (174 aa)
	I79_021784	Sentrin-specific protease 1. (445 aa)
	I79_019340	Suppressor of fused-like. (144 aa)
	Wnt1	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (370 aa)
	Styx	Serine/threonine/tyrosine-interacting protein. (223 aa)
	H671_4g12945	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family. (128 aa)
	I79_017768	Casein kinase II subunit alpha. (322 aa)
	I79_016874	Cyclin-dependent kinase inhibitor 2A, isoforms 1/2. (92 aa)
	I79_016735	UBX domain-containing protein 1. (213 aa)
	I79_016467	Large proline-rich protein BAT3. (953 aa)
	N4bp1	NEDD4-binding protein 1. (811 aa)
	Sufu	Suppressor of fused-like. (266 aa)
	I79_014966	60S ribosomal protein L5. (296 aa)
	I79_015104	Tripartite motif-containing protein 39. (488 aa)
	I79_015679	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (198 aa)
	I79_015156	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (81 aa)
	Psen2	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (448 aa)
	I79_014744	Ubiquitin carboxyl-terminal hydrolase 14; Belongs to the peptidase C19 family. (457 aa)
	Uchl5	Ubiquitin carboxyl-terminal hydrolase. (329 aa)
	Qrich2	Uncharacterized protein. (213 aa)
	I79_014353	Glutamine-rich protein 2. (53 aa)
	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha. (314 aa)
	I79_013690	Uncharacterized protein. (509 aa)
	CUNH16orf96	Glutamine-rich protein 2. (367 aa)
	Anks1a	Ankyrin repeat and SAM domain-containing protein 1A. (1097 aa)
	I79_012334	60S ribosomal protein L5. (297 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Anks1a	Bag5	G3HRZ9	G3H379	Ankyrin repeat and SAM domain-containing protein 1A.	BAG family molecular chaperone regulator 5-like protein.	0.412
Bag5	Anks1a	G3H379	G3HRZ9	BAG family molecular chaperone regulator 5-like protein.	Ankyrin repeat and SAM domain-containing protein 1A.	0.412
Bag5	Sgta	G3H379	G3HSM4	BAG family molecular chaperone regulator 5-like protein.	Small glutamine-rich tetratricopeptide repeat-containing protein alpha.	0.494
CUNH16orf96	I79_013690	G3HS62	G3HS64	Glutamine-rich protein 2.	Uncharacterized protein.	0.597
H671_4g12945	I79_005279	G3I5G8	G3H4R9	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_006157	G3I5G8	G3H732	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_006308	G3I5G8	G3H7H7	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_007632	G3I5G8	G3HB18	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L11.	0.875
H671_4g12945	I79_008911	G3I5G8	G3HEC9	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_009367	G3I5G8	G3HFK6	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_009995	G3I5G8	G3HH97	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5-A.	0.764
H671_4g12945	I79_011482	G3I5G8	G3HL96	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_012334	G3I5G8	G3HNJ6	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_014966	G3I5G8	G3HVH8	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_015679	G3I5G8	G3HXF6	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.875
H671_4g12945	I79_021865	G3I5G8	G3IDT1	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_023040	G3I5G8	G3IGW3	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L5.	0.764
H671_4g12945	I79_025376	G3I5G8	G3IN64	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L11.	0.875
H671_4g12945	Rpl11	G3I5G8	G3HMV2	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.875
H671_4g12945	Rpl23	G3I5G8	G3H5W4	60S ribosomal protein L23-like protein; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.901