STRINGSTRING
Gata3 Gata3 Igf1 Igf1 Parp1 Parp1 I79_017064 I79_017064 Gtf2b Gtf2b CgPICR_015008 CgPICR_015008 Ep300 Ep300 Tgfb1 Tgfb1 I79_020506 I79_020506 Klf4 Klf4 I79_022189 I79_022189 Rb1 Rb1 Niban2 Niban2 CgPICR_003973 CgPICR_003973 I79_025191 I79_025191 Neurod1 Neurod1 Ctnnb1 Ctnnb1 I79_021102 I79_021102 I79_005032 I79_005032 Pax6 Pax6 Traf6 Traf6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Gata3Trans-acting T-cell-specific transcription factor GATA-3. (443 aa)
Igf1Insulin-like growth factor I. (75 aa)
Parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (971 aa)
I79_017064Tripartite motif-containing protein 6. (58 aa)
Gtf2bTranscription initiation factor IIB. (285 aa)
CgPICR_015008Histone H1.0. (194 aa)
Ep300Histone acetyltransferase p300. (2415 aa)
Tgfb1Transforming growth factor beta-1. (237 aa)
I79_020506POU domain, class 4, transcription factor 2. (207 aa)
Klf4Krueppel-like factor 4. (474 aa)
I79_022189Tripartite motif-containing protein 6. (488 aa)
Rb1Retinoblastoma-associated protein. (302 aa)
Niban2Niban-like protein 1. (368 aa)
CgPICR_003973Hepatitis B virus X-interacting protein-like. (133 aa)
I79_025191Tripartite motif-containing protein 6. (212 aa)
Neurod1Neurogenic differentiation factor. (355 aa)
Ctnnb1Catenin beta-1. (781 aa)
I79_021102Histone H1.0. (178 aa)
I79_005032DDRGK domain-containing protein 1. (345 aa)
Pax6Paired box protein Pax-6. (544 aa)
Traf6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (508 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.