STRINGSTRING
I79_000092 I79_000092 I79_000973 I79_000973 Tbx5 Tbx5 H671_3g9885 H671_3g9885 I79_004750 I79_004750 I79_023010 I79_023010 Nap1l2 Nap1l2 Tacstd2 Tacstd2 Vsir Vsir Dhx36 Dhx36 Sp7 Sp7 I79_013817 I79_013817 I79_011919 I79_011919 I79_011918 I79_011918 Gsk3b Gsk3b Ptn Ptn I79_007135 I79_007135 Sox5 Sox5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_000092Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
I79_000973Transcription factor SOX-10. (360 aa)
Tbx5T-box transcription factor TBX5. (518 aa)
H671_3g9885RNA-binding protein 24. (251 aa)
I79_004750Transcription factor SOX-5. (211 aa)
I79_023010Latent-transforming growth factor beta-binding protein 3. (624 aa)
Nap1l2Nucleosome assembly protein 1-like 2; Belongs to the nucleosome assembly protein (NAP) family. (463 aa)
Tacstd2Tumor-associated calcium signal transducer 2-like protein. (318 aa)
VsirPlatelet receptor Gi24. (271 aa)
Dhx36Putative ATP-dependent RNA helicase DHX36. (922 aa)
Sp7Transcription factor Sp7. (411 aa)
I79_013817NAD-dependent deacetylase sirtuin-6. (334 aa)
I79_011919Transcription factor SOX-6. (237 aa)
I79_011918Transcription factor Sox-6. (395 aa)
Gsk3bGlycogen synthase kinase-3 beta. (328 aa)
PtnPleiotrophin. (168 aa)
I79_007135Homeobox protein Nkx-2.5. (223 aa)
Sox5Transcription factor SOX-5. (347 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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