(20 nodes) Positive regulation of autophagosome assembly network (Cricetulus griseus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_006552	WD repeat domain phosphoinositide-interacting protein 1. (444 aa)
	Ulk1	Serine/threonine-protein kinase ULK1. (999 aa)
	Becn1	Beclin-1. (448 aa)
	Wdr45	WD repeat domain phosphoinositide-interacting protein 4. (360 aa)
	Snx30	Sorting nexin-30. (405 aa)
	Moap1	Modulator of apoptosis 1. (353 aa)
	Lrsam1	E3 ubiquitin-protein ligase LRSAM1. (727 aa)
	Snx18	Sorting nexin-18. (333 aa)
	Pip4k2c	Phosphatidylinositol-5-phosphate 4-kinase type-2 gamma. (363 aa)
	I79_016240	Beclin-1. (119 aa)
	I79_019091	Autophagy-related protein 2-like A. (455 aa)
	Atg2a	Autophagy-related protein 2-like A. (945 aa)
	Elapor1	UPF0577 protein KIAA1324. (128 aa)
	H671_1g2680	Sorting nexin-7. (381 aa)
	I79_024748	UPF0577 protein KIAA1324. (550 aa)
	I79_005506	Phosphatidylinositol-5-phosphate 4-kinase type-2 alpha. (320 aa)
	I79_003347	Rab3 GTPase-activating protein catalytic subunit. (748 aa)
	Rab3gap2	Rab3 GTPase-activating protein non-catalytic subunit. (1302 aa)
	I79_005532	Ras-related protein Ral-B. (227 aa)
	Pip4k2b	Phosphatidylinositol-5-phosphate 4-kinase type-2 beta. (375 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atg2a	I79_006552	G3I6G2	G3H854	Autophagy-related protein 2-like A.	WD repeat domain phosphoinositide-interacting protein 1.	0.733
Atg2a	I79_019091	G3I6G2	G3I6G1	Autophagy-related protein 2-like A.	Autophagy-related protein 2-like A.	0.896
Atg2a	Ulk1	G3I6G2	G3HCC3	Autophagy-related protein 2-like A.	Serine/threonine-protein kinase ULK1.	0.967
Atg2a	Wdr45	G3I6G2	G3HNC1	Autophagy-related protein 2-like A.	WD repeat domain phosphoinositide-interacting protein 4.	0.724
Becn1	I79_006552	G3HLZ1	G3H854	Beclin-1.	WD repeat domain phosphoinositide-interacting protein 1.	0.601
Becn1	Ulk1	G3HLZ1	G3HCC3	Beclin-1.	Serine/threonine-protein kinase ULK1.	0.978
Elapor1	I79_024748	G3IC77	G3ILI2	UPF0577 protein KIAA1324.	UPF0577 protein KIAA1324.	0.857
H671_1g2680	Snx18	G3IEU6	G3HVF0	Sorting nexin-7.	Sorting nexin-18.	0.448
H671_1g2680	Ulk1	G3IEU6	G3HCC3	Sorting nexin-7.	Serine/threonine-protein kinase ULK1.	0.418
I79_003347	Rab3gap2	G3GZQ4	G3GRD7	Rab3 GTPase-activating protein catalytic subunit.	Rab3 GTPase-activating protein non-catalytic subunit.	0.998
I79_005506	Pip4k2b	G3H5C5	G3H5W1	Phosphatidylinositol-5-phosphate 4-kinase type-2 alpha.	Phosphatidylinositol-5-phosphate 4-kinase type-2 beta.	0.819
I79_005506	Pip4k2c	G3H5C5	G3HW50	Phosphatidylinositol-5-phosphate 4-kinase type-2 alpha.	Phosphatidylinositol-5-phosphate 4-kinase type-2 gamma.	0.819
I79_006552	Atg2a	G3H854	G3I6G2	WD repeat domain phosphoinositide-interacting protein 1.	Autophagy-related protein 2-like A.	0.733
I79_006552	Becn1	G3H854	G3HLZ1	WD repeat domain phosphoinositide-interacting protein 1.	Beclin-1.	0.601
I79_006552	I79_016240	G3H854	G3HYU8	WD repeat domain phosphoinositide-interacting protein 1.	Beclin-1.	0.601
I79_006552	I79_019091	G3H854	G3I6G1	WD repeat domain phosphoinositide-interacting protein 1.	Autophagy-related protein 2-like A.	0.733
I79_006552	Ulk1	G3H854	G3HCC3	WD repeat domain phosphoinositide-interacting protein 1.	Serine/threonine-protein kinase ULK1.	0.778
I79_006552	Wdr45	G3H854	G3HNC1	WD repeat domain phosphoinositide-interacting protein 1.	WD repeat domain phosphoinositide-interacting protein 4.	0.461
I79_016240	I79_006552	G3HYU8	G3H854	Beclin-1.	WD repeat domain phosphoinositide-interacting protein 1.	0.601
I79_016240	Ulk1	G3HYU8	G3HCC3	Beclin-1.	Serine/threonine-protein kinase ULK1.	0.792