STRINGSTRING
I79_005201 I79_005201 Lgmn Lgmn I79_018849 I79_018849 I79_020968 I79_020968 I79_020969 I79_020969 I79_022034 I79_022034 Sema5a Sema5a I79_007063 I79_007063 I79_007264 I79_007264 Smoc2 Smoc2 Fgf16 Fgf16 I79_006225 I79_006225 I79_005202 I79_005202 I79_004031 I79_004031
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_005201Serine/threonine-protein kinase D1. (116 aa)
LgmnLegumain. (438 aa)
I79_018849Serine/threonine-protein kinase D2. (513 aa)
I79_020968Fibroblast growth factor 18; Belongs to the heparin-binding growth factors family. (104 aa)
I79_020969Fibroblast growth factor 18. (85 aa)
I79_022034Vascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1150 aa)
Sema5aSemaphorin-5A. (1046 aa)
I79_007063Hepatocyte growth factor receptor. (1222 aa)
I79_007264Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family. (84 aa)
Smoc2SPARC-related modular calcium-binding protein 2. (457 aa)
Fgf16Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (115 aa)
I79_006225Sonic hedgehog protein. (226 aa)
I79_005202Serine/threonine-protein kinase D1. (748 aa)
I79_004031Fibroblast growth factor receptor. (731 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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