(45 nodes) Immunoglobulin complex network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_017345	Activation-induced cytidine deaminase. (261 aa)
	Cd4	T-cell surface glycoprotein CD4. (447 aa)
	Cdr2	Cerebellar degeneration-related protein 2. (380 aa)
	I79_023611	Serpin B8; Belongs to the serpin family. (374 aa)
	I79_023823	Ig-like domain-containing protein. (146 aa)
	CgPICR_021777	Ig kappa chain V-I region. (125 aa)
	I79_024404	Ig-like domain-containing protein. (123 aa)
	I79_024405	Ig-like domain-containing protein. (135 aa)
	CgPICR_022593	Ig-like domain-containing protein. (123 aa)
	I79_024737	Ig-like domain-containing protein. (99 aa)
	CgPICR_021844	Ig kappa chain V-I region. (138 aa)
	I79_024865	Uncharacterized protein. (233 aa)
	CgPICR_022665	IGKV4-1. (154 aa)
	I79_025100	Ig-like domain-containing protein. (121 aa)
	I79_025101	Ig-like domain-containing protein. (173 aa)
	I79_025130	Ig-like domain-containing protein. (164 aa)
	CgPICR_022653	Ig-like domain-containing protein. (121 aa)
	CgPICR_022606	Ig-like domain-containing protein. (109 aa)
	I79_025467	IGv domain-containing protein. (49 aa)
	I79_022616	Olfactory receptor 148; Belongs to the G-protein coupled receptor 1 family. (232 aa)
	I79_022615	Olfactory receptor 148; Belongs to the G-protein coupled receptor 1 family. (227 aa)
	I79_021935	Pre-B lymphocyte protein 3. (56 aa)
	I79_021676	Complement receptor type 2. (1038 aa)
	I79_021254	Olfactory receptor. (302 aa)
	Morn5	MORN repeat-containing protein 5. (182 aa)
	I79_016921	B-cell antigen receptor complex-associated protein alpha chain. (181 aa)
	I79_015109	Interleukin-6. (174 aa)
	I79_014518	Uncharacterized protein. (236 aa)
	I79_014517	Ig-like domain-containing protein. (109 aa)
	Serpinb1	Leukocyte elastase inhibitor A; Belongs to the serpin family. (379 aa)
	I79_013386	Ig-like domain-containing protein. (107 aa)
	I79_008411	Serpin B7; Belongs to the serpin family. (64 aa)
	Serpinb7	Serpin B7; Belongs to the serpin family. (174 aa)
	I79_008413	Serpin B11; Belongs to the serpin family. (281 aa)
	Sdc1	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (285 aa)
	I79_009012	Uncharacterized protein. (57 aa)
	Lime1	Lck-interacting transmembrane adapter 1. (218 aa)
	Syk	Tyrosine-protein kinase. (611 aa)
	I79_012384	Leukocyte common antigen. (962 aa)
	Klhl15	Kelch-like protein 15. (604 aa)
	I79_013385	Ig-like domain-containing protein. (99 aa)
	Cd40	Tumor necrosis factor receptor superfamily member 5. (118 aa)
	I79_008311	B-cell antigen receptor complex-associated protein beta chain. (211 aa)
	Spn	Leukosialin. (392 aa)
	I79_008409	Serpin B7; Belongs to the serpin family. (71 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cd4	Cd40	G3GUN9	G3H8U5	T-cell surface glycoprotein CD4.	Tumor necrosis factor receptor superfamily member 5.	0.949
Cd4	Cdr2	G3GUN9	G3IHK0	T-cell surface glycoprotein CD4.	Cerebellar degeneration-related protein 2.	0.423
Cd4	I79_008311	G3GUN9	G3HCU4	T-cell surface glycoprotein CD4.	B-cell antigen receptor complex-associated protein beta chain.	0.605
Cd4	I79_012384	G3GUN9	G3HNP2	T-cell surface glycoprotein CD4.	Leukocyte common antigen.	0.734
Cd4	I79_015109	G3GUN9	G3HVW6	T-cell surface glycoprotein CD4.	Interleukin-6.	0.849
Cd4	I79_016921	G3GUN9	G3I0N3	T-cell surface glycoprotein CD4.	B-cell antigen receptor complex-associated protein alpha chain.	0.756
Cd4	I79_017345	G3GUN9	G3I1S6	T-cell surface glycoprotein CD4.	Activation-induced cytidine deaminase.	0.692
Cd4	I79_021676	G3GUN9	G3IDA0	T-cell surface glycoprotein CD4.	Complement receptor type 2.	0.492
Cd4	Sdc1	G3GUN9	G3HDJ3	T-cell surface glycoprotein CD4.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.571
Cd4	Syk	G3GUN9	G3HIA4	T-cell surface glycoprotein CD4.	Tyrosine-protein kinase.	0.754
Cd40	Cd4	G3H8U5	G3GUN9	Tumor necrosis factor receptor superfamily member 5.	T-cell surface glycoprotein CD4.	0.949
Cd40	I79_012384	G3H8U5	G3HNP2	Tumor necrosis factor receptor superfamily member 5.	Leukocyte common antigen.	0.450
Cd40	I79_015109	G3H8U5	G3HVW6	Tumor necrosis factor receptor superfamily member 5.	Interleukin-6.	0.677
Cd40	I79_017345	G3H8U5	G3I1S6	Tumor necrosis factor receptor superfamily member 5.	Activation-induced cytidine deaminase.	0.587
Cd40	Syk	G3H8U5	G3HIA4	Tumor necrosis factor receptor superfamily member 5.	Tyrosine-protein kinase.	0.463
Cdr2	Cd4	G3IHK0	G3GUN9	Cerebellar degeneration-related protein 2.	T-cell surface glycoprotein CD4.	0.423
CgPICR_021777	I79_008311	G3IKD7	G3HCU4	Ig kappa chain V-I region.	B-cell antigen receptor complex-associated protein beta chain.	0.559
CgPICR_021777	I79_013385	G3IKD7	G3HRC0	Ig kappa chain V-I region.	Ig-like domain-containing protein.	0.404
CgPICR_021777	I79_013386	G3IKD7	G3HRC1	Ig kappa chain V-I region.	Ig-like domain-containing protein.	0.404
CgPICR_021777	I79_015109	G3IKD7	G3HVW6	Ig kappa chain V-I region.	Interleukin-6.	0.477