103 items (Cricetulus griseus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Syn2	Synapsin-2. (282 aa)
	I79_014994	Vesicular glutamate transporter 3. (461 aa)
	Syt1	Synaptotagmin-1. (422 aa)
	Atp6v1g2	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (118 aa)
	C3H16orf70	UPF0183 protein C16orf70-like. (620 aa)
	Oprk1	Kappa-type opioid receptor. (176 aa)
	I79_016658	Orphan sodium-and chloride-dependent neurotransmitter transporter NTT5. (630 aa)
	I79_016663	Vesicular glutamate transporter 1. (468 aa)
	Dmd	Dystrophin. (617 aa)
	I79_017352	ATP-binding cassette transporter sub-family C member 8. (2352 aa)
	Syngr1	Synaptogyrin-1. (211 aa)
	Atp6v0c	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (155 aa)
	Syt11	Synaptotagmin-11. (111 aa)
	Synj2	Synaptojanin-2. (1190 aa)
	I79_009488	Synaptojanin-2. (94 aa)
	Gria1	Glutamate receptor 1. (75 aa)
	I79_009477	Glutamate receptor 1. (695 aa)
	Exph5	Exophilin-5. (506 aa)
	Slc6a9	Sodium-and chloride-dependent glycine transporter 1. (180 aa)
	Apc	Adenomatous polyposis coli protein. (2488 aa)
	Rab5b	Ras-related protein Rab-5B. (215 aa)
	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha. (314 aa)
	Mctp1	Multiple C2 and transmembrane domain-containing protein 1. (143 aa)
	Rab4b	Ras-related protein Rab-4B. (211 aa)
	Syp	Synaptophysin. (310 aa)
	I79_011716	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (80 aa)
	Atp6v0a1	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (169 aa)
	Rab5c	Ras-related protein Rab-5C. (216 aa)
	Sh3gl2	Endophilin-A1. (152 aa)
	I79_018155	Double C2-like domain-containing protein gamma. (51 aa)
	Rab27b	Ras-related protein Rab-27B. (105 aa)
	Bin1	Myc box-dependent-interacting protein 1. (522 aa)
	I79_018359	Double C2-like domain-containing protein. (402 aa)
	Rab11b	Ras-related protein Rab-11B. (218 aa)
	CgPICR_017737	Lysosome-associated membrane glycoprotein 1. (403 aa)
	Scamp5	Secretory carrier-associated membrane protein. (235 aa)
	Gad2	Glutamate decarboxylase 2. (171 aa)
	Cacfd1	Transmembrane protein C9orf7. (171 aa)
	Slc10a4	Sodium/bile acid cotransporter 4. (437 aa)
	Syn1	Synapsin-1. (384 aa)
	Sv2b	Synaptic vesicle glycoprotein 2B-like protein. (458 aa)
	I79_021846	Gamma-aminobutyric acid receptor subunit alpha-2; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (377 aa)
	Clta	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (140 aa)
	I79_022161	Dystrophin. (655 aa)
	Syt9	Synaptotagmin-9. (222 aa)
	I79_022705	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (298 aa)
	I79_022712	Glutamate [NMDA] receptor subunit zeta-1. (998 aa)
	I79_022988	Mitochondrial sodium/hydrogen exchanger NHA2. (494 aa)
	Slc6a17	Orphan sodium-and chloride-dependent neurotransmitter transporter NTT4. (436 aa)
	I79_000139	Protein unc-13-like C. (972 aa)
	Unc13c	Protein unc-13-like C. (1107 aa)
	Atp6ap2	Renin receptor. (300 aa)
	Meltf	Disks large-like 1; Belongs to the MAGUK family. (1536 aa)
	Rab35	Ras-related protein Rab-35. (173 aa)
	Dtnbp1	Dysbindin. (125 aa)
	Vamp1	Vesicle-associated membrane protein 1. (95 aa)
	Rab3c	Ras-related protein Rab-3C. (220 aa)
	I79_001894	Ras-related protein Rab-3B. (100 aa)
	Rab3b	Ras-related protein Rab-3B. (133 aa)
	Wfs1	Wolframin. (889 aa)
	Stx16	Syntaxin-16; Belongs to the syntaxin family. (326 aa)
	Bcl2l1	Bcl-2-like protein 1. (233 aa)
	Bcl2	Apoptosis regulator Bcl-2. (203 aa)
	Rab4a	Ras-related protein Rab-4A. (218 aa)
	I79_008197	Receptor-type tyrosine-protein phosphatase S. (515 aa)
	Ptprs	Receptor-type tyrosine-protein phosphatase S. (889 aa)
	I79_008062	SNARE-associated protein Snapin. (107 aa)
	Rab26	Ras-related protein Rab-26. (255 aa)
	I79_002551	Otoferlin. (2118 aa)
	I79_007518	Fer-1-like protein 4. (1845 aa)
	Mal2	Protein MAL2. (183 aa)
	Lamp1	Lysosome-associated membrane glycoprotein 1. (370 aa)
	H671_1g2314	Islet cell autoantigen 1 isoform 1. (536 aa)
	I79_010620	Alpha-synuclein; Belongs to the synuclein family. (166 aa)
	Synpr	Synaptoporin. (275 aa)
	I79_010139	Synaptosomal-associated protein 47. (419 aa)
	I79_009846	Synapsin-3. (252 aa)
	Syn3	Synapsin-3. (302 aa)
	Stx1a	Syntaxin-1A; Belongs to the syntaxin family. (259 aa)
	I79_006445	Glutamate receptor 2. (876 aa)
	I79_006390	Synaptic vesicular amine transporter. (414 aa)
	Syndig1	Synapse differentiation-inducing protein 1. (258 aa)
	Rab3a	Ras-related protein Rab-3A-like protein. (220 aa)
	Syt2	Synaptotagmin-2. (419 aa)
	Clcn3	Chloride channel protein. (866 aa)
	Sv2c	Synaptic vesicle glycoprotein 2C. (717 aa)
	Sv2a	Synaptic vesicle glycoprotein 2A. (742 aa)
	Septin8	Septin-8; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (486 aa)
	I79_004243	Rabphilin-3A. (596 aa)
	Stx12	Syntaxin-12; Belongs to the syntaxin family. (274 aa)
	Oprd1	Delta-type opioid receptor; Belongs to the G-protein coupled receptor 1 family. (323 aa)
	Sema4c	Semaphorin-4C; Belongs to the semaphorin family. (834 aa)
	I79_003918	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (151 aa)
	Usp50	Transient receptor potential cation channel subfamily M member 7. (2128 aa)
	I79_002576	Zinc transporter 3. (413 aa)
	Prkn	E3 ubiquitin-protein ligase parkin. (146 aa)
	Slc17a6	Vesicular glutamate transporter 2. (233 aa)
	Slc6a15	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (729 aa)
	I79_009801	E3 ubiquitin-protein ligase parkin. (126 aa)
	I79_014316	Receptor-type tyrosine-protein phosphatase N2. (234 aa)
	I79_014317	Receptor-type tyrosine-protein phosphatase N2. (503 aa)
	I79_014588	Disks large-like 2. (254 aa)
	Vamp7	Vesicle-associated membrane protein 7-like isoform 1; Belongs to the synaptobrevin family. (220 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atp6ap2	Atp6v0a1	G3GSG4	G3HLX1	Renin receptor.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.875
Atp6ap2	Atp6v0c	G3GSG4	G3I2T6	Renin receptor.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.960
Atp6ap2	Atp6v1g2	G3GSG4	G3HZH2	Renin receptor.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.872
Atp6ap2	I79_011716	G3GSG4	G3HLX2	Renin receptor.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.875
Atp6v0a1	Atp6ap2	G3HLX1	G3GSG4	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	Renin receptor.	0.875
Atp6v0a1	Atp6v0c	G3HLX1	G3I2T6	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.995
Atp6v0a1	Atp6v1g2	G3HLX1	G3HZH2	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.937
Atp6v0c	Atp6ap2	G3I2T6	G3GSG4	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Renin receptor.	0.960
Atp6v0c	Atp6v0a1	G3I2T6	G3HLX1	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.995
Atp6v0c	Atp6v1g2	G3I2T6	G3HZH2	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.968
Atp6v0c	I79_011716	G3I2T6	G3HLX2	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.974
Atp6v1g2	Atp6ap2	G3HZH2	G3GSG4	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Renin receptor.	0.872
Atp6v1g2	Atp6v0a1	G3HZH2	G3HLX1	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.937
Atp6v1g2	Atp6v0c	G3HZH2	G3I2T6	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.968
Atp6v1g2	I79_011716	G3HZH2	G3HLX2	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.937
Atp6v1g2	Rab3a	G3HZH2	G3H4A8	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Ras-related protein Rab-3A-like protein.	0.703
Bcl2	Bcl2l1	G3HD46	G3HEA7	Apoptosis regulator Bcl-2.	Bcl-2-like protein 1.	0.902
Bcl2	I79_010620	G3HD46	G3HIY8	Apoptosis regulator Bcl-2.	Alpha-synuclein; Belongs to the synuclein family.	0.474
Bcl2	Prkn	G3HD46	G3HGR2	Apoptosis regulator Bcl-2.	E3 ubiquitin-protein ligase parkin.	0.437
Bcl2l1	Bcl2	G3HEA7	G3HD46	Bcl-2-like protein 1.	Apoptosis regulator Bcl-2.	0.902