STRINGSTRING
I79_022161 I79_022161 Arf6 Arf6 Pdpn Pdpn Ttyh1 Ttyh1 I79_018173 I79_018173 Dmd Dmd Msn Msn Ninj1 Ninj1 Gap43 Gap43 Antxr1 Antxr1 Palm Palm Fzd9 Fzd9 Utrn Utrn Syne2 Syne2 I79_005354 I79_005354 I79_005353 I79_005353
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_022161Dystrophin. (655 aa)
Arf6ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
PdpnPodoplanin. (55 aa)
Ttyh1Protein tweety homolog; Probable chloride channel. (111 aa)
I79_018173Carabin. (446 aa)
DmdDystrophin. (617 aa)
MsnMoesin. (293 aa)
Ninj1Ninjurin-1. (102 aa)
Gap43Neuromodulin. (200 aa)
Antxr1Anthrax toxin receptor 1. (837 aa)
PalmParalemmin. (216 aa)
Fzd9Frizzled-9; Belongs to the G-protein coupled receptor Fz/Smo family. (439 aa)
UtrnUtrophin. (3291 aa)
Syne2Nesprin-2. (1667 aa)
I79_005354Nesprin-2. (54 aa)
I79_005353Nesprin-2. (903 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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