(64 nodes) Ciliary basal body network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Lca5	Lebercilin. (713 aa)
	I79_000262	Protein FAM92B. (254 aa)
	I79_000430	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin. (533 aa)
	Ift20	Intraflagellar transport protein 20-like. (132 aa)
	Ahi1	Jouberin. (988 aa)
	Cep131	5-azacytidine-induced protein 1. (882 aa)
	I79_003174	Pericentriolar material 1 protein. (1960 aa)
	I79_003264	WD repeat-containing protein 51A. (193 aa)
	Rpgrip1l	Protein fantom. (1265 aa)
	Ift81	Intraflagellar transport protein 81-like. (680 aa)
	H671_1g1639	Ras-related protein Rab-8A-like protein. (236 aa)
	Ift57	Intraflagellar transport protein 57-like. (296 aa)
	Poc1a	WD repeat-containing protein 51A. (78 aa)
	I79_006693	Intraflagellar transport protein 88-like. (533 aa)
	Pcnt	Pericentrin. (3034 aa)
	Ift140	Intraflagellar transport protein 140-like. (1462 aa)
	I79_008481	Intraflagellar transport protein 57-like. (162 aa)
	I79_008650	Protein FAM161A. (561 aa)
	Ift43	Tubulin polyglutamylase TTLL5. (1247 aa)
	I79_010454	Centrosomal protein of 290 kDa. (2172 aa)
	I79_010469	Bardet-Biedl syndrome 2 protein-like. (594 aa)
	Mks1	Meckel syndrome type 1 protein-like. (561 aa)
	CgPICR_014540	Centrin-2-like protein. (163 aa)
	Cetn3	Centrin-3. (167 aa)
	I79_012319	Uncharacterized protein C14orf45-like. (153 aa)
	Bbof1	Uncharacterized protein C14orf45-like. (229 aa)
	CUNH5orf49	Uncharacterized protein C5orf49-like. (168 aa)
	I79_014784	Uncharacterized protein C9orf117-like. (56 aa)
	I79_014785	Uncharacterized protein C9orf117-like. (52 aa)
	Cfap157	Uncharacterized protein C9orf117-like. (67 aa)
	Ift122	Intraflagellar transport protein 122-like. (292 aa)
	I79_015236	EF-hand domain-containing family member C2. (471 aa)
	I79_015541	Protein FAM92A1. (243 aa)
	Rab28	Ras-related protein Rab-28. (221 aa)
	I79_015961	Serologically defined colon cancer antigen 8. (184 aa)
	I79_016812	Nephrocystin-4. (828 aa)
	Ift52	Intraflagellar transport protein 52-like. (425 aa)
	Ofd1	Oral-facial-digital syndrome 1 protein-like. (957 aa)
	I79_017136	Protein FAM154A. (475 aa)
	Traf3ip1	TRAF3-interacting protein 1. (88 aa)
	Kif17	Kinesin-like protein KIF17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (168 aa)
	I79_019218	IQ domain-containing protein D. (351 aa)
	Tapt1	Transmembrane anterior posterior transformation protein 1. (243 aa)
	Tbc1d30	TBC1 domain family member 30. (787 aa)
	C2cd3	C2 domain-containing protein 3. (2233 aa)
	Ccdc178	Uncharacterized protein C18orf34-like. (241 aa)
	Ift80	Intraflagellar transport protein 80-like. (366 aa)
	I79_021023	Protein FAM179B. (1763 aa)
	I79_021177	Kinesin-like protein KIF7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1191 aa)
	Wdr11	Bromodomain and WD repeat-containing protein 2. (1224 aa)
	I79_022636	Dual specificity protein phosphatase CDC14A. (424 aa)
	Fam166a	UPF0605 protein FAM166A. (319 aa)
	Rabl2b	Rab-like protein 2A. (109 aa)
	I79_023284	Protein FAM154A. (409 aa)
	Cetn2	Centrin-2. (172 aa)
	I79_023668	A-kinase anchor protein 9. (79 aa)
	I79_023907	Tubulin polyglutamylase TTLL11. (467 aa)
	I79_024143	LisH domain-containing protein ARMC9. (555 aa)
	I79_024290	Uncharacterized protein KIAA0586. (129 aa)
	Kiaa0586	Uncharacterized protein KIAA0586. (206 aa)
	I79_025139	Tubulin polyglutamylase TTLL11. (99 aa)
	Armc9	LisH domain-containing protein ARMC9. (69 aa)
	I79_025697	Intraflagellar transport protein 80-like. (113 aa)
	I79_026275	A-kinase anchor protein 9. (62 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ahi1	H671_1g1639	G3GW72	G3H4I1	Jouberin.	Ras-related protein Rab-8A-like protein.	0.686
Ahi1	I79_006693	G3GW72	G3H8J1	Jouberin.	Intraflagellar transport protein 88-like.	0.498
Ahi1	I79_010454	G3GW72	G3HII3	Jouberin.	Centrosomal protein of 290 kDa.	0.679
Ahi1	I79_016812	G3GW72	G3I0D3	Jouberin.	Nephrocystin-4.	0.572
Ahi1	Mks1	G3GW72	G3HJ74	Jouberin.	Meckel syndrome type 1 protein-like.	0.869
Ahi1	Ofd1	G3GW72	G3I183	Jouberin.	Oral-facial-digital syndrome 1 protein-like.	0.585
Ahi1	Pcnt	G3GW72	G3H8X7	Jouberin.	Pericentrin.	0.424
Ahi1	Rpgrip1l	G3GW72	G3H0R2	Jouberin.	Protein fantom.	0.801
Bbof1	I79_012319	G3HNI3	G3HNI1	Uncharacterized protein C14orf45-like.	Uncharacterized protein C14orf45-like.	0.918
C2cd3	I79_006693	G3I9W1	G3H8J1	C2 domain-containing protein 3.	Intraflagellar transport protein 88-like.	0.578
C2cd3	I79_010454	G3I9W1	G3HII3	C2 domain-containing protein 3.	Centrosomal protein of 290 kDa.	0.618
C2cd3	I79_016812	G3I9W1	G3I0D3	C2 domain-containing protein 3.	Nephrocystin-4.	0.574
C2cd3	Ofd1	G3I9W1	G3I183	C2 domain-containing protein 3.	Oral-facial-digital syndrome 1 protein-like.	0.715
C2cd3	Rpgrip1l	G3I9W1	G3H0R2	C2 domain-containing protein 3.	Protein fantom.	0.556
CUNH5orf49	I79_008481	G3HQE4	G3HDA2	Uncharacterized protein C5orf49-like.	Intraflagellar transport protein 57-like.	0.481
CUNH5orf49	I79_015236	G3HQE4	G3HW83	Uncharacterized protein C5orf49-like.	EF-hand domain-containing family member C2.	0.535
CUNH5orf49	Ift57	G3HQE4	G3H7C5	Uncharacterized protein C5orf49-like.	Intraflagellar transport protein 57-like.	0.481
CUNH5orf49	Tbc1d30	G3HQE4	G3I8P8	Uncharacterized protein C5orf49-like.	TBC1 domain family member 30.	0.423
Cep131	I79_003174	G3GX57	G3GZB3	5-azacytidine-induced protein 1.	Pericentriolar material 1 protein.	0.707
Cep131	I79_006693	G3GX57	G3H8J1	5-azacytidine-induced protein 1.	Intraflagellar transport protein 88-like.	0.484