(17 nodes) Cystine knot, C-terminal network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_003408	Slit-like 1 protein. (1482 aa)
	Grem2	Gremlin. (168 aa)
	I79_007339	Protein NOV-like. (256 aa)
	Cer1	Cerberus. (272 aa)
	Nbl1	Neuroblastoma suppressor of tumorigenicity 1-like protein. (178 aa)
	Sostdc1	Sclerostin domain-containing protein 1. (193 aa)
	I79_017351	Otogelin. (2309 aa)
	Ndp	Norrin. (113 aa)
	I79_018603	Mucin-5B. (3442 aa)
	I79_018605	Uncharacterized protein. (1001 aa)
	Ccn2	Connective tissue growth factor-like protein. (348 aa)
	Grem1	Gremlin-1. (117 aa)
	Ccn1	Protein CYR61. (491 aa)
	I79_025170	Slit-like 2 protein. (345 aa)
	I79_025994	WNT1-inducible-signaling pathway protein 1. (136 aa)
	I79_001376	Von Willebrand factor. (3626 aa)
	I79_001957	Slit-like 3 protein. (751 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ccn2	I79_001376	G3IAP3	G3GUL3	Connective tissue growth factor-like protein.	Von Willebrand factor.	0.497
Grem1	Grem2	G3ID48	G3H6M6	Gremlin-1.	Gremlin.	0.901
Grem2	Grem1	G3H6M6	G3ID48	Gremlin.	Gremlin-1.	0.901
I79_001376	Ccn2	G3GUL3	G3IAP3	Von Willebrand factor.	Connective tissue growth factor-like protein.	0.497
I79_018603	I79_018605	G3I558	G3I561	Mucin-5B.	Uncharacterized protein.	0.656
I79_018605	I79_018603	G3I561	G3I558	Uncharacterized protein.	Mucin-5B.	0.656
Nbl1	Sostdc1	G3HU31	G3HXA0	Neuroblastoma suppressor of tumorigenicity 1-like protein.	Sclerostin domain-containing protein 1.	0.559
Sostdc1	Nbl1	G3HXA0	G3HU31	Sclerostin domain-containing protein 1.	Neuroblastoma suppressor of tumorigenicity 1-like protein.	0.559