(29 nodes) Alkaline-phosphatase-like, core domain superfamily network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Galns	N-acetylgalactosamine-6-sulfatase. (483 aa)
	Arsh	Arylsulfatase H. (604 aa)
	Enpp5	Ectonucleotide pyrophosphatase/phosphodiesterase family member 5. (477 aa)
	Enpp4	Ectonucleotide pyrophosphatase/phosphodiesterase family member 4. (452 aa)
	Arsg	Arylsulfatase G. (295 aa)
	I79_006186	Arylsulfatase K. (308 aa)
	I79_019052	Intestinal alkaline phosphatase 1; Belongs to the alkaline phosphatase family. (193 aa)
	I79_019053	Embryonic alkaline phosphatase. (128 aa)
	I79_000458	Arylsulfatase H. (121 aa)
	Enpp6	Ectonucleotide pyrophosphatase/phosphodiesterase family member 6. (428 aa)
	Arsb	Arylsulfatase B. (90 aa)
	Arsa	Arylsulfatase A. (518 aa)
	Arsj	Arylsulfatase J. (571 aa)
	Enpp7	Ectonucleotide pyrophosphatase/phosphodiesterase family member 7. (809 aa)
	I79_019056	Alkaline phosphatase. (559 aa)
	Gns	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family. (474 aa)
	Enpp1	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1. (906 aa)
	Sgsh	N-sulphoglucosamine sulphohydrolase. (502 aa)
	I79_017780	Extracellular sulfatase Sulf-1. (787 aa)
	Arsl	Arylsulfatase E. (606 aa)
	I79_019054	Alkaline phosphatase. (529 aa)
	I79_007340	Ectonucleotide pyrophosphatase/phosphodiesterase family member 2. (592 aa)
	Sulf2	Extracellular sulfatase; Exhibits arylsulfatase activity and highly specific endoglucosamine-6-sulfatase activity. It can remove sulfate from the C- 6 position of glucosamine within specific subregions of intact heparin. Belongs to the sulfatase family. (875 aa)
	I79_019055	Alkaline phosphatase. (547 aa)
	I79_013663	Arylsulfatase I. (484 aa)
	I79_012144	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (2171 aa)
	Alpl	Alkaline phosphatase. (524 aa)
	I79_008921	GPI ethanolamine phosphate transferase 2. (914 aa)
	Pign	GPI ethanolamine phosphate transferase 1. (664 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Alpl	Enpp1	G3HIL5	G3IAP2	Alkaline phosphatase.	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1.	0.558
Alpl	Enpp7	G3HIL5	G3HTD8	Alkaline phosphatase.	Ectonucleotide pyrophosphatase/phosphodiesterase family member 7.	0.439
Arsa	Arsb	G3IH84	G3H310	Arylsulfatase A.	Arylsulfatase B.	0.944
Arsa	Arsg	G3IH84	G3H855	Arylsulfatase A.	Arylsulfatase G.	0.950
Arsa	Arsj	G3IH84	G3IEL1	Arylsulfatase A.	Arylsulfatase J.	0.565
Arsa	Galns	G3IH84	G3GRS9	Arylsulfatase A.	N-acetylgalactosamine-6-sulfatase.	0.626
Arsa	Gns	G3IH84	G3I8P7	Arylsulfatase A.	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.	0.421
Arsa	I79_006186	G3IH84	G3H759	Arylsulfatase A.	Arylsulfatase K.	0.691
Arsa	I79_013663	G3IH84	G3HS37	Arylsulfatase A.	Arylsulfatase I.	0.575
Arsa	Sgsh	G3IH84	G3HTF0	Arylsulfatase A.	N-sulphoglucosamine sulphohydrolase.	0.548
Arsb	Arsa	G3H310	G3IH84	Arylsulfatase B.	Arylsulfatase A.	0.944
Arsb	Arsg	G3H310	G3H855	Arylsulfatase B.	Arylsulfatase G.	0.944
Arsb	Galns	G3H310	G3GRS9	Arylsulfatase B.	N-acetylgalactosamine-6-sulfatase.	0.689
Arsb	Gns	G3H310	G3I8P7	Arylsulfatase B.	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.	0.548
Arsb	I79_006186	G3H310	G3H759	Arylsulfatase B.	Arylsulfatase K.	0.500
Arsg	Arsa	G3H855	G3IH84	Arylsulfatase G.	Arylsulfatase A.	0.950
Arsg	Arsb	G3H855	G3H310	Arylsulfatase G.	Arylsulfatase B.	0.944
Arsg	Arsh	G3H855	G3I3M9	Arylsulfatase G.	Arylsulfatase H.	0.408
Arsg	Arsj	G3H855	G3IEL1	Arylsulfatase G.	Arylsulfatase J.	0.721
Arsg	Galns	G3H855	G3GRS9	Arylsulfatase G.	N-acetylgalactosamine-6-sulfatase.	0.453