STRINGSTRING
Irf9 Irf9 I79_008544 I79_008544 I79_008377 I79_008377 Farsa Farsa Psmd12 Psmd12 Foxj3 Foxj3 I79_008249 I79_008249 H1-6 H1-6 CgPICR_009866 CgPICR_009866 Larp4b Larp4b Rfx7 Rfx7 Foxb1 Foxb1 Cdt1 Cdt1 I79_000252 I79_000252 Foxf1 Foxf1 Irf8 Irf8 Foxp1 Foxp1 Irf2 Irf2 Tfdp2 Tfdp2 Psmd11 Psmd11 Ssb Ssb I79_001274 I79_001274 Foxm1 Foxm1 I79_001540 I79_001540 I79_001865 I79_001865 Foxp2 Foxp2 I79_002183 I79_002183 E2f3 E2f3 Irf4 Irf4 Foxf2 Foxf2 Gps1 Gps1 Foxk2 Foxk2 Cul1 Cul1 Foxo3 Foxo3 Phf23 Phf23 Tcp11l1 Tcp11l1 I79_003037 I79_003037 Ehf Ehf H671_1g2299 H671_1g2299 EIF3M EIF3M Snrnp200 Snrnp200 I79_003557 I79_003557 Plek2 Plek2 Rpa2 Rpa2 Irf6 Irf6 I79_004472 I79_004472 Rfx5 Rfx5 Larp6 Larp6 I79_004964 I79_004964 I79_005032 I79_005032 Ell Ell Mnd1 Mnd1 Foxn2 Foxn2 Gtf2e2 Gtf2e2 Wrn Wrn Spic Spic Lix1 Lix1 Ell2 Ell2 I79_006520 I79_006520 Gtf2f2 Gtf2f2 I79_006559 I79_006559 Prex1 Prex1 E2f1 E2f1 Elf2 Elf2 I79_007550 I79_007550 I79_007569 I79_007569 Elk4 Elk4 E2f6 E2f6 Etv6 Etv6 METAP2 METAP2 I79_007841 I79_007841 CDC6 CDC6 Elk3 Elk3 I79_026038 I79_026038 I79_025735 I79_025735 I79_025680 I79_025680 I79_025489 I79_025489 I79_024894 I79_024894 Stn1 Stn1 I79_024013 I79_024013 I79_023429 I79_023429 I79_023218 I79_023218 Elf1 Elf1 Anapc2 Anapc2 Blm Blm H671_2g5523 H671_2g5523 Larp7 Larp7 Cul3 Cul3 I79_021102 I79_021102 I79_020948 I79_020948 Cops4 Cops4 I79_020117 I79_020117 Foxa1 Foxa1 Arid2 Arid2 Tfdp1 Tfdp1 I79_019512 I79_019512 Foxo4 Foxo4 Spib Spib Rfx3 Rfx3 I79_018615 I79_018615 CgPICR_015008 CgPICR_015008 Foxj2 Foxj2 Hp1bp3 Hp1bp3 Ascc3 Ascc3 Dvl1 Dvl1 H671_3g9402 H671_3g9402 Dvl3 Dvl3 Etv1 Etv1 Foxp4 Foxp4 I79_016918 I79_016918 Gsk3a Gsk3a Cul5 Cul5 Ets2 Ets2 Foxo1 Foxo1 Nol3 Nol3 Cul4b Cul4b Foxa2 Foxa2 Shprh Shprh Elk1 Elk1 Larp4 Larp4 Foxr2 Foxr2 I79_015356 I79_015356 Foxh1 Foxh1 Fev Fev I79_015018 I79_015018 I79_014884 I79_014884 Fam20c Fam20c Foxj1 Foxj1 I79_014206 I79_014206 Cul2 Cul2 E2f7 E2f7 I79_014003 I79_014003 Spdef Spdef I79_013567 I79_013567 I79_013548 I79_013548 Pa2g4 Pa2g4 Ubr2 Ubr2 H1-5 H1-5 I79_012666 I79_012666 I79_012461 I79_012461 Foxp3 Foxp3 I79_011974 I79_011974 Gabpa Gabpa Vps25 Vps25 Psmc3ip Psmc3ip Dgkg Dgkg I79_011236 I79_011236 Depdc5 Depdc5 Cul4a Cul4a I79_010912 I79_010912 Snf8 Snf8 Foxi3 Foxi3 I79_010751 I79_010751 Rapgef5 Rapgef5 I79_010640 I79_010640 CgPICR_017184 CgPICR_017184 Psmd6 Psmd6 Foxn4 Foxn4 Cops3 Cops3 Vps36 Vps36 Kat6a Kat6a Etv3l Etv3l Etv3 Etv3 Larp1 Larp1 Plek Plek Foxs1 Foxs1 E2f8 E2f8 H1-1 H1-1 I79_007871 I79_007871 Adar Adar Rfx2 Rfx2 Gtf2f1 Gtf2f1 I79_008702 I79_008702 I79_008693 I79_008693
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Irf9Interferon regulatory factor 9. (398 aa)
I79_008544Meiotic recombination protein REC8-like. (451 aa)
I79_008377MHC class II regulatory factor RFX1. (863 aa)
FarsaPhenylalanyl-tRNA synthetase alpha chain-like protein. (508 aa)
Psmd1226S proteasome non-ATPase regulatory subunit 12. (456 aa)
Foxj3Forkhead box protein J3. (606 aa)
I79_008249Forkhead box protein O6. (270 aa)
H1-6Histone H1t. (150 aa)
CgPICR_009866HIST1H1D. (212 aa)
Larp4bLa-related protein 4B. (615 aa)
Rfx7DNA-binding protein RFX7. (1459 aa)
Foxb1Forkhead box protein B1. (325 aa)
Cdt1DNA replication factor Cdt1. (553 aa)
I79_000252Forkhead box protein L1. (334 aa)
Foxf1Forkhead box protein F1. (320 aa)
Irf8Interferon regulatory factor 8. (424 aa)
Foxp1Forkhead box protein P1. (696 aa)
Irf2Interferon regulatory factor. (349 aa)
Tfdp2Transcription factor. (446 aa)
Psmd1126S proteasome non-ATPase regulatory subunit 11. (263 aa)
SsbLupus La protein-like. (407 aa)
I79_001274Rap guanine nucleotide exchange factor 4. (761 aa)
Foxm1Forkhead box protein M1. (764 aa)
I79_001540DEP domain-containing protein 1B. (647 aa)
I79_001865Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (630 aa)
Foxp2Forkhead box protein P2. (492 aa)
I79_002183Histone acetyltransferase MYST4. (709 aa)
E2f3Transcription factor E2F3. (458 aa)
Irf4Interferon regulatory factor 4. (418 aa)
Foxf2Forkhead box protein F2. (335 aa)
Gps1COP9 signalosome complex subunit 1. (475 aa)
Foxk2Forkhead box protein K2. (448 aa)
Cul1Cullin-1; Belongs to the cullin family. (776 aa)
Foxo3Forkhead box protein O3. (672 aa)
Phf23Segment polarity protein dishevelled-like DVL-2. (697 aa)
Tcp11l1T-complex protein 11-like protein 1. (786 aa)
I79_003037ETS-related transcription factor Elf-5. (232 aa)
EhfETS-likeous factor. (282 aa)
H671_1g2299Interferon regulatory factor 5 isoform 1. (559 aa)
EIF3MEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (374 aa)
Snrnp200U5 small nuclear ribonucleoprotein 200 kDa helicase. (1377 aa)
I79_003557Double-strand-break repair protein rad21-like. (687 aa)
Plek2Pleckstrin-2. (339 aa)
Rpa2Replication protein A 32 kDa subunit. (248 aa)
Irf6Interferon regulatory factor 6. (467 aa)
I79_004472Carbonic anhydrase 13. (359 aa)
Rfx5DNA-binding protein RFX5. (657 aa)
Larp6La-related protein 6. (492 aa)
I79_004964ETS-related transcription factor Elf-4. (716 aa)
I79_005032DDRGK domain-containing protein 1. (345 aa)
EllRNA polymerase II elongation factor ELL. (545 aa)
Mnd1Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (180 aa)
Foxn2Forkhead box protein N2. (423 aa)
Gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
WrnWerner syndrome ATP-dependent helicase-like. (1405 aa)
SpicTranscription factor Spi-C. (86 aa)
Lix1Serine/threonine-protein kinase RIO2. (702 aa)
Ell2RNA polymerase II elongation factor ELL2. (507 aa)
I79_006520Friend leukemia integration 1 transcription factor. (404 aa)
Gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
I79_006559Regulator of G-protein signaling 9. (492 aa)
Prex1Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein. (1607 aa)
E2f1Transcription factor E2F1. (367 aa)
Elf2ETS-related transcription factor Elf-2-like isoform 1. (532 aa)
I79_007550Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family. (263 aa)
I79_007569Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (162 aa)
Elk4ETS domain-containing protein Elk-4. (430 aa)
E2f6Transcription factor E2F6. (243 aa)
Etv6Transcription factor ETV6. (410 aa)
METAP2Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (478 aa)
I79_007841Z-DNA-binding protein 1. (235 aa)
CDC6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (561 aa)
Elk3ETS domain-containing protein Elk-3. (408 aa)
I79_02603826S proteasome non-ATPase regulatory subunit 3. (190 aa)
I79_025735ETS translocation variant 4. (207 aa)
I79_025680Forkhead box protein P4. (206 aa)
I79_025489Forkhead box protein I2. (202 aa)
I79_02489426S proteasome non-ATPase regulatory subunit 13. (99 aa)
Stn1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (378 aa)
I79_024013Integral membrane protein GPR155. (712 aa)
I79_023429Forkhead box protein P4. (631 aa)
I79_023218Interferon regulatory factor 3. (377 aa)
Elf1ETS-related transcription factor Elf-1. (616 aa)
Anapc2Anaphase-promoting complex subunit 2; Belongs to the cullin family. (269 aa)
BlmATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (464 aa)
H671_2g5523Rap guanine nucleotide exchange factor 3-like protein. (979 aa)
Larp7La-related protein 7. (217 aa)
Cul3Cullin-3; Belongs to the cullin family. (746 aa)
I79_021102Histone H1.0. (178 aa)
I79_020948Interferon regulatory factor 1. (369 aa)
Cops4COP9 signalosome complex subunit 4. (406 aa)
I79_020117Forkhead box protein R1. (280 aa)
Foxa1Hepatocyte nuclear factor 3-alpha. (434 aa)
Arid2AT-rich interactive domain-containing protein 2. (1284 aa)
Tfdp1Transcription factor. (410 aa)
I79_019512Eukaryotic translation initiation factor 3 subunit C; Belongs to the eIF-3 subunit C family. (201 aa)
Foxo4Forkhead box protein O4. (506 aa)
SpibTranscription factor Spi-B. (269 aa)
Rfx3Transcription factor RFX3. (298 aa)
I79_018615DNA-binding protein RFX6. (582 aa)
CgPICR_015008Histone H1.0. (194 aa)
Foxj2Forkhead box protein J2. (573 aa)
Hp1bp3Heterochromatin protein 1-binding protein 3. (561 aa)
Ascc3Activating signal cointegrator 1 complex subunit 3. (2202 aa)
Dvl1Putative segment polarity protein dishevelledVL-1-like protein. (695 aa)
H671_3g9402Interferon regulatory factor 7. (473 aa)
Dvl3Segment polarity protein dishevelled-like DVL-3. (503 aa)
Etv1ETS translocation variant 1. (477 aa)
Foxp4Forkhead box protein P4. (685 aa)
I79_016918ETS domain-containing transcription factor ERF. (58 aa)
Gsk3aGlycogen synthase kinase-3 alpha. (653 aa)
Cul5Cullin-5; Belongs to the cullin family. (780 aa)
Ets2Protein C-ets-2. (462 aa)
Foxo1Forkhead box protein O1. (469 aa)
Nol3Heat shock factor protein 4; Belongs to the HSF family. (915 aa)
Cul4bCullin-4B; Belongs to the cullin family. (834 aa)
Foxa2Hepatocyte nuclear factor 3-beta. (430 aa)
ShprhE3 ubiquitin-protein ligase SHPRH. (1676 aa)
Elk1ETS domain-containing protein Elk-1. (425 aa)
Larp4La-related protein 4. (188 aa)
Foxr2Forkhead box protein R2-like protein. (302 aa)
I79_015356Heat shock factor protein 1. (524 aa)
Foxh1Forkhead box protein H1. (367 aa)
FevProtein FEV. (260 aa)
I79_015018Histone H1oo. (285 aa)
I79_014884Transcriptional regulator ERG. (261 aa)
Fam20cDentin matrix protein 4. (776 aa)
Foxj1Forkhead box protein J1. (421 aa)
I79_014206Dedicator of cytokinesis protein 2. (785 aa)
Cul2Cullin-2; Belongs to the cullin family. (745 aa)
E2f7Transcription factor E2F7. (900 aa)
I79_014003Regulator of G-protein signaling 6. (263 aa)
SpdefSAM pointed domain-containing Ets transcription factor. (325 aa)
I79_013567Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein. (865 aa)
I79_013548SECIS-binding protein 2-like. (1291 aa)
Pa2g4Proliferation-associated protein 2G4. (394 aa)
Ubr2E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1755 aa)
H1-5Histone H1.5. (222 aa)
I79_012666Hepatocyte nuclear factor 3-gamma. (594 aa)
I79_012461Transcription factor RFX4. (659 aa)
Foxp3Forkhead box protein P3. (428 aa)
I79_011974La-related protein 1B. (418 aa)
GabpaGA-binding protein alpha chain. (651 aa)
Vps25Vacuolar protein-sorting-associated protein 25. (176 aa)
Psmc3ipHomologous-pairing protein 2-like. (217 aa)
DgkgDiacylglycerol kinase; Belongs to the ETS family. (1244 aa)
I79_011236Heat shock factor protein 2. (398 aa)
Depdc5DEP domain-containing protein 5. (1569 aa)
Cul4aCullin-4A; Belongs to the cullin family. (582 aa)
I79_010912Spermatid-specific linker histone H1-like protein. (174 aa)
Snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
Foxi3Forkhead box protein I3. (269 aa)
I79_010751Eukaryotic translation initiation factor 3 subunit K. (174 aa)
Rapgef5Rap guanine nucleotide exchange factor 5. (133 aa)
I79_010640La-related protein 4. (510 aa)
CgPICR_01718440S ribosomal protein S19. (76 aa)
Psmd626S proteasome non-ATPase regulatory subunit 6. (389 aa)
Foxn4Forkhead box protein N4. (484 aa)
Cops3COP9 signalosome complex subunit 3. (394 aa)
Vps36Vacuolar protein-sorting-associated protein 36. (354 aa)
Kat6aHistone acetyltransferase MYST3. (200 aa)
Etv3lETS translocation variant 3-like protein. (204 aa)
Etv3ETS translocation variant 3. (513 aa)
Larp1La-related protein 1. (571 aa)
PlekPleckstrin. (327 aa)
Foxs1Forkhead box protein S1. (329 aa)
E2f8Transcription factor E2F8. (867 aa)
H1-1Histone H1.1. (213 aa)
I79_007871Regulator of G-protein signaling 11. (436 aa)
AdarDouble-stranded RNA-specific adenosine deaminase. (1174 aa)
Rfx2DNA-binding protein RFX2. (692 aa)
Gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (508 aa)
I79_008702Histone H2A type 1; Belongs to the histone H2A family. (331 aa)
I79_008693Histone H1.3. (207 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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