(33 nodes) Keratan sulfate biosynthesis network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

Your Input:
	Acan	Aggrecan core protein. (2120 aa)
	I79_022071	Exportin-6. (256 aa)
	I79_022703	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (172 aa)
	B3gnt7	Hexosyltransferase. (408 aa)
	Xpo6	Exportin-6. (443 aa)
	Chst6	Sulfotransferase; Belongs to the sulfotransferase 1 family. (396 aa)
	I79_025546	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (340 aa)
	B4galt6	Beta-1,4-galactosyltransferase 6. (235 aa)
	St3gal6	Type 2 lactosamine alpha-2,3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (320 aa)
	B4gat1	N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase. (415 aa)
	B4galt4	Beta-1,4-galactosyltransferase 4. (344 aa)
	Moap1	Modulator of apoptosis 1. (353 aa)
	B4galt3	Beta-1,4-galactosyltransferase 3. (395 aa)
	Fmod	Fibromodulin. (376 aa)
	Prelp	Prolargin. (377 aa)
	I79_012691	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (208 aa)
	I79_012618	Exportin-6. (289 aa)
	Omd	Osteomodulin. (419 aa)
	Lum	Lumican. (399 aa)
	Kera	Keratocan. (156 aa)
	St3gal4	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (359 aa)
	St3gal3	CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (398 aa)
	B4galt2	Beta-1,4-galactosyltransferase 2. (369 aa)
	B4galt5	Beta-1,4-galactosyltransferase 5. (344 aa)
	B3gnt2	Hexosyltransferase. (397 aa)
	St3gal2	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (178 aa)
	I79_005127	Hexosyltransferase. (362 aa)
	B3gnt4	Hexosyltransferase. (82 aa)
	Chst1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (411 aa)
	Chst2	Sulfotransferase; Belongs to the sulfotransferase 1 family. (165 aa)
	I79_018846	PNMA-like protein 1. (598 aa)
	B4galt1	Beta-1,4-galactosyltransferase 1. (258 aa)
	Slc35d2	UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter. (315 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Acan	Chst2	G3ICD5	G3GSZ5	Aggrecan core protein.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.404
Acan	Fmod	G3ICD5	G3HQC6	Aggrecan core protein.	Fibromodulin.	0.788
Acan	Kera	G3ICD5	G3HJG4	Aggrecan core protein.	Keratocan.	0.602
Acan	Lum	G3ICD5	G3HJG5	Aggrecan core protein.	Lumican.	0.814
Acan	Omd	G3ICD5	G3HP27	Aggrecan core protein.	Osteomodulin.	0.638
Acan	Prelp	G3ICD5	G3HQC5	Aggrecan core protein.	Prolargin.	0.603
Acan	St3gal4	G3ICD5	G3HFJ0	Aggrecan core protein.	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase; Belongs to the glycosyltransferase 29 family.	0.417
B3gnt2	B3gnt4	G3HDQ9	G3H264	Hexosyltransferase.	Hexosyltransferase.	0.900
B3gnt2	B4galt1	G3HDQ9	G3I8W2	Hexosyltransferase.	Beta-1,4-galactosyltransferase 1.	0.928
B3gnt2	B4galt2	G3HDQ9	G3HFF7	Hexosyltransferase.	Beta-1,4-galactosyltransferase 2.	0.924
B3gnt2	B4galt3	G3HDQ9	G3HU17	Hexosyltransferase.	Beta-1,4-galactosyltransferase 3.	0.949
B3gnt2	B4galt4	G3HDQ9	G3I1K4	Hexosyltransferase.	Beta-1,4-galactosyltransferase 4.	0.936
B3gnt2	Kera	G3HDQ9	G3HJG4	Hexosyltransferase.	Keratocan.	0.422
B3gnt2	St3gal3	G3HDQ9	G3HFG3	Hexosyltransferase.	CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase; Belongs to the glycosyltransferase 29 family.	0.733
B3gnt2	St3gal6	G3HDQ9	G3I3V5	Hexosyltransferase.	Type 2 lactosamine alpha-2,3-sialyltransferase; Belongs to the glycosyltransferase 29 family.	0.934
B3gnt4	B3gnt2	G3H264	G3HDQ9	Hexosyltransferase.	Hexosyltransferase.	0.900
B3gnt4	B4galt1	G3H264	G3I8W2	Hexosyltransferase.	Beta-1,4-galactosyltransferase 1.	0.921
B3gnt4	B4galt2	G3H264	G3HFF7	Hexosyltransferase.	Beta-1,4-galactosyltransferase 2.	0.930
B3gnt4	B4galt3	G3H264	G3HU17	Hexosyltransferase.	Beta-1,4-galactosyltransferase 3.	0.911
B3gnt4	B4galt4	G3H264	G3I1K4	Hexosyltransferase.	Beta-1,4-galactosyltransferase 4.	0.924