(20 nodes) Chondroitin sulfate biosynthesis network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Csgalnact2	Hexosyltransferase. (300 aa)
	Dcn	Decorin; May affect the rate of fibrils formation. (362 aa)
	Bcan	Brevican core protein. (910 aa)
	Chst9	Carbohydrate sulfotransferase. (343 aa)
	Ncan	Neurocan core protein. (1234 aa)
	Cspg4	Chondroitin sulfate proteoglycan 4. (2323 aa)
	Chst12	Carbohydrate sulfotransferase. (419 aa)
	I79_000305	Carbohydrate sulfotransferase. (201 aa)
	I79_020752	Chondroitin sulfate proteoglycan 4. (1364 aa)
	Chpf	Hexosyltransferase. (612 aa)
	Chst3	Sulfotransferase; Belongs to the sulfotransferase 1 family. (477 aa)
	Chsy3	Hexosyltransferase. (520 aa)
	I79_017044	Chondroitin sulfate synthase 3. (122 aa)
	Chsy1	Hexosyltransferase. (203 aa)
	Csgalnact1	Hexosyltransferase. (530 aa)
	I79_007682	Hexosyltransferase. (770 aa)
	I79_014935	Chondroitin sulfate proteoglycan 4. (849 aa)
	Bgn	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (369 aa)
	Chst11	Carbohydrate sulfotransferase. (352 aa)
	Vcan	Uncharacterized protein. (607 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bcan	Bgn	G3HG76	G3HSX8	Brevican core protein.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.568
Bcan	Chpf	G3HG76	G3I627	Brevican core protein.	Hexosyltransferase.	0.402
Bcan	Chst11	G3HG76	G3HQL4	Brevican core protein.	Carbohydrate sulfotransferase.	0.447
Bcan	Chst12	G3HG76	G3GVF2	Brevican core protein.	Carbohydrate sulfotransferase.	0.507
Bcan	Csgalnact1	G3HG76	G3H6V4	Brevican core protein.	Hexosyltransferase.	0.574
Bcan	Csgalnact2	G3HG76	G3HLG2	Brevican core protein.	Hexosyltransferase.	0.536
Bcan	Cspg4	G3HG76	G3H0E4	Brevican core protein.	Chondroitin sulfate proteoglycan 4.	0.451
Bcan	Dcn	G3HG76	G3HJG6	Brevican core protein.	Decorin; May affect the rate of fibrils formation.	0.707
Bcan	I79_000305	G3HG76	G3GRZ8	Brevican core protein.	Carbohydrate sulfotransferase.	0.401
Bcan	I79_007682	G3HG76	G3HB61	Brevican core protein.	Hexosyltransferase.	0.402
Bcan	I79_014935	G3HG76	G3HVE8	Brevican core protein.	Chondroitin sulfate proteoglycan 4.	0.451
Bcan	I79_020752	G3HG76	G3IAX0	Brevican core protein.	Chondroitin sulfate proteoglycan 4.	0.451
Bcan	Ncan	G3HG76	G3H471	Brevican core protein.	Neurocan core protein.	0.711
Bcan	Vcan	G3HG76	G3HKI0	Brevican core protein.	Uncharacterized protein.	0.755
Bgn	Bcan	G3HSX8	G3HG76	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Brevican core protein.	0.568
Bgn	Dcn	G3HSX8	G3HJG6	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Decorin; May affect the rate of fibrils formation.	0.783
Bgn	Vcan	G3HSX8	G3HKI0	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Uncharacterized protein.	0.665
Chpf	Bcan	G3I627	G3HG76	Hexosyltransferase.	Brevican core protein.	0.402
Chpf	Chsy1	G3I627	G3H5A1	Hexosyltransferase.	Hexosyltransferase.	0.962
Chpf	Chsy3	G3I627	G3I102	Hexosyltransferase.	Hexosyltransferase.	0.933