STRINGSTRING
Dhrs9 Dhrs9 I79_004065 I79_004065 Plekhd1 Plekhd1 Ptchd1 Ptchd1 Lrat Lrat Rdh8 Rdh8 I79_011217 I79_011217 I79_008965 I79_008965 Myo7b Myo7b Smpdl3a Smpdl3a Myo7a Myo7a Rbp4 Rbp4 Rlbp1 Rlbp1 I79_023401 I79_023401 I79_024531 I79_024531 Rdh5 Rdh5 I79_013524 I79_013524 I79_013467 I79_013467 I79_013468 I79_013468 Sdr9c7 Sdr9c7 I79_013470 I79_013470 Rho Rho I79_015172 I79_015172 Rpe65 Rpe65 Rdh10 Rdh10 I79_016206 I79_016206 Ptchd4 Ptchd4 Napepld Napepld Ptchd3 Ptchd3 Ttr Ttr I79_025121 I79_025121
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dhrs9Dehydrogenase/reductase SDR family member 9; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (322 aa)
I79_004065Retinol dehydrogenase 12. (279 aa)
Plekhd1UPF0639 protein. (505 aa)
Ptchd1Patched domain-containing protein 1. (771 aa)
LratLecithin retinol acyltransferase-like protein. (227 aa)
Rdh8Retinol dehydrogenase 8. (110 aa)
I79_011217Myosin-VIIb. (140 aa)
I79_008965Stimulated by retinoic acid gene 6 protein-like. (553 aa)
Myo7bMyosin-VIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2022 aa)
Smpdl3aAcid sphingomyelinase-like phosphodiesterase 3a. (416 aa)
Myo7aMyosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2184 aa)
Rbp4Retinol-binding protein 4; Belongs to the calycin superfamily. Lipocalin family. (338 aa)
Rlbp1Retinaldehyde-binding protein 1. (331 aa)
I79_023401Cytochrome P450 4V3. (209 aa)
I79_024531Retinal-specific ATP-binding cassette transporter. (273 aa)
Rdh511-cis retinol dehydrogenase. (66 aa)
I79_01352411-cis retinol dehydrogenase. (54 aa)
I79_013467Retinol dehydrogenase 7. (108 aa)
I79_013468Retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (270 aa)
Sdr9c7Short chain dehydrogenase/reductase family 9C member 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (319 aa)
I79_013470Retinol dehydrogenase 7. (176 aa)
RhoRhodopsin. (348 aa)
I79_015172Retinol dehydrogenase 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (317 aa)
Rpe65Retinoid isomerohydrolase. (924 aa)
Rdh10Retinol dehydrogenase 10. (65 aa)
I79_016206Patched domain-containing protein C6orf138. (207 aa)
Ptchd4Patched domain-containing protein C6orf138. (510 aa)
NapepldN-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D. (236 aa)
Ptchd3Patched domain-containing protein 3. (343 aa)
TtrTransthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (147 aa)
I79_025121Retinal-specific ATP-binding cassette transporter. (217 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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