STRINGSTRING
Tubb1 Tubb1 Katnal2 Katnal2 Iqca1 Iqca1 I79_022495 I79_022495 I79_022721 I79_022721 I79_023067 I79_023067 H671_2g5922 H671_2g5922 CgPICR_018383 CgPICR_018383 I79_023825 I79_023825 Nup205 Nup205 CgPICR_020142 CgPICR_020142 Ncoa5 Ncoa5 Nup35 Nup35 I79_006372 I79_006372 I79_006179 I79_006179 Tubb4a Tubb4a Banf1 Banf1 Emd Emd I79_017698 I79_017698 I79_017699 I79_017699 Nup98 Nup98 Chmp4c Chmp4c Rangap1 Rangap1 I79_020044 I79_020044 Lemd2 Lemd2 I79_019146 I79_019146 Tuba1a Tuba1a Cc2d1a Cc2d1a I79_008375 I79_008375 I79_008539 I79_008539 Tm9sf1 Tm9sf1 Lmna Lmna Fignl1 Fignl1 Vrk1 Vrk1 I79_010039 I79_010039 Nup93 Nup93 Sirt2 Sirt2 Nup155 Nup155 I79_011725 I79_011725 I79_012040 I79_012040 Tubb6 Tubb6 I79_012167 I79_012167 I79_012380 I79_012380 CgPICR_014495 CgPICR_014495 Tuba8 Tuba8 Ccnb3 Ccnb3 CgPICR_014552 CgPICR_014552 Ccnb1 Ccnb1 I79_025501 I79_025501 Ppp2r1a Ppp2r1a Vps4a Vps4a Adgrd1 Adgrd1 I79_022113 I79_022113 Chmp2b Chmp2b Lmnb2 Lmnb2 Seh1l Seh1l Fign Fign Cdk1 Cdk1 Tuba4a Tuba4a Ppp2r2a Ppp2r2a I79_016131 I79_016131 Ppp2ca Ppp2ca I79_016573 I79_016573 I79_016574 I79_016574 I79_025586 I79_025586 I79_025620 I79_025620 I79_024154 I79_024154 I79_024397 I79_024397 I79_024656 I79_024656 I79_024791 I79_024791 I79_025350 I79_025350 I79_025385 I79_025385 I79_025414 I79_025414 I79_025456 I79_025456 I79_025474 I79_025474 Tubal3 Tubal3 Lbr Lbr Ccnb2 Ccnb2 I79_000930 I79_000930 Ndc1 Ndc1 I79_001060 I79_001060 I79_001100 I79_001100 Chmp7 Chmp7 I79_001766 I79_001766 Banf2 Banf2 Cc2d1b Cc2d1b I79_002130 I79_002130 Nup133 Nup133 Sec13 Sec13 Chmp6 Chmp6 I79_002522 I79_002522 Msrb3 Msrb3 Nup107 Nup107 I79_002900 I79_002900 I79_003059 I79_003059 I79_003938 I79_003938 Adgrb2 Adgrb2 Rcc1 Rcc1 I79_004339 I79_004339 I79_004627 I79_004627 I79_004741 I79_004741 I79_004909 I79_004909 Vrk2 Vrk2 I79_005438 I79_005438 I79_005464 I79_005464 I79_005692 I79_005692 Nup37 Nup37 I79_006178 I79_006178 Ankle2 Ankle2 Ube2i Ube2i Asb10 Asb10 Rbm39 Rbm39 Chmp4b Chmp4b I79_007383 I79_007383
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tubb1Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (454 aa)
Katnal2Katanin p60 ATPase-containing subunit A-like 2. (163 aa)
Iqca1IQ and AAA domain-containing protein 1. (249 aa)
I79_022495IQ and AAA domain-containing protein 1. (90 aa)
I79_022721Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (373 aa)
I79_023067Nucleoporin NUP188-like. (471 aa)
H671_2g5922GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
CgPICR_018383Tubulin alpha-1B chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (210 aa)
I79_023825Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
Nup205Nuclear pore complex protein Nup205. (1972 aa)
CgPICR_020142Tubulin alpha chain. (75 aa)
Ncoa5Nuclear receptor coactivator 5. (573 aa)
Nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (324 aa)
I79_006372Protein ELYS; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1603 aa)
I79_006179Regulator of chromosome condensation. (421 aa)
Tubb4aTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
Banf1Barrier-to-autointegration factor. (89 aa)
EmdEmerin. (186 aa)
I79_017698Charged multivesicular body protein 2a. (51 aa)
I79_017699Charged multivesicular body protein 2a. (72 aa)
Nup98Nuclear pore complex protein Nup98-Nup96. (1070 aa)
Chmp4cCharged multivesicular body protein 4c. (232 aa)
Rangap1Ran GTPase-activating protein 1. (586 aa)
I79_020044Brain-specific angiogenesis inhibitor 1; Belongs to the G-protein coupled receptor 2 family. (1537 aa)
Lemd2LEM domain-containing protein 2. (271 aa)
I79_019146Tubulin alpha-3E chain. (105 aa)
Tuba1aTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
Cc2d1aCoiled-coil and C2 domain-containing protein 1A-like isoform 1. (943 aa)
I79_008375DDB1-and CUL4-associated factor 15. (465 aa)
I79_008539Magnesium-dependent phosphatase 1. (160 aa)
Tm9sf1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (606 aa)
LmnaLamin-A/C; Belongs to the intermediate filament family. (563 aa)
Fignl1Fidgetin-like protein 1; Belongs to the AAA ATPase family. (677 aa)
Vrk1Serine/threonine-protein kinase VRK1; Belongs to the protein kinase superfamily. (396 aa)
I79_010039Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (298 aa)
Nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (780 aa)
Sirt2NAD-dependent deacetylase sirtuin-2. (83 aa)
Nup155Nuclear pore complex protein Nup155. (369 aa)
I79_011725Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform. (249 aa)
I79_012040Tubulin alpha-1C chain; Belongs to the tubulin family. (239 aa)
Tubb6Tubulin beta-6 chain. (215 aa)
I79_012167Tubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (167 aa)
I79_012380IQ and AAA domain-containing protein 1. (162 aa)
CgPICR_014495GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
Tuba8Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
Ccnb3G2/mitotic-specific cyclin-B3; Belongs to the cyclin family. (1169 aa)
CgPICR_014552Tubulin alpha-1C chain. (134 aa)
Ccnb1G2/mitotic-specific cyclin-B1; Belongs to the cyclin family. (409 aa)
I79_025501Nucleoporin SEH1. (201 aa)
Ppp2r1aSerine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform. (534 aa)
Vps4aVacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family. (437 aa)
Adgrd1Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family. (807 aa)
I79_022113Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
Chmp2bCharged multivesicular body protein 2b. (202 aa)
Lmnb2Lamin-B2; Belongs to the intermediate filament family. (602 aa)
Seh1lNucleoporin SEH1; Belongs to the WD repeat SEC13 family. (329 aa)
FignFidgetin isoform 1; Belongs to the AAA ATPase family. (748 aa)
Cdk1Cell division control protein 2-like; Belongs to the protein kinase superfamily. (297 aa)
Tuba4aTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (433 aa)
Ppp2r2aSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (457 aa)
I79_016131Charged multivesicular body protein 6. (186 aa)
Ppp2caSerine/threonine-protein phosphatase. (303 aa)
I79_016573Uncharacterized protein. (75 aa)
I79_016574Tubulin alpha-3 chain. (76 aa)
I79_025586Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (328 aa)
I79_025620Nucleoporin SEH1. (208 aa)
I79_024154Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (78 aa)
I79_024397GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (128 aa)
I79_024656Nucleoporin NUP188-like. (1240 aa)
I79_024791IQ and AAA domain-containing protein 1. (191 aa)
I79_025350Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (177 aa)
I79_025385Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (334 aa)
I79_025414Tubulin alpha chain, nucleomorph; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (388 aa)
I79_025456Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (84 aa)
I79_025474Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (202 aa)
Tubal3Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (376 aa)
LbrLamin-B receptor. (619 aa)
Ccnb2G2/mitotic-specific cyclin-B2; Belongs to the cyclin family. (398 aa)
I79_000930Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (509 aa)
Ndc1Nucleoporin NDC1. (672 aa)
I79_001060Protein Njmu-R1. (274 aa)
I79_001100Tubulin alpha-3 chain; Belongs to the tubulin family. (239 aa)
Chmp7Charged multivesicular body protein 7. (449 aa)
I79_001766Tubulin alpha-1C chain; Belongs to the tubulin family. (217 aa)
Banf2Barrier-to-autointegration factor-like protein. (90 aa)
Cc2d1bCoiled-coil and C2 domain-containing protein 1B. (851 aa)
I79_002130Tubulin beta-6 chain; Belongs to the tubulin family. (192 aa)
Nup133Nuclear pore complex protein Nup133. (632 aa)
Sec13Protein SEC13-like; Belongs to the WD repeat SEC13 family. (322 aa)
Chmp6Charged multivesicular body protein 6. (176 aa)
I79_002522GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (227 aa)
Msrb3Inner nuclear membrane protein Man1. (479 aa)
Nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (931 aa)
I79_002900Nuclear pore complex protein Nup160. (1215 aa)
I79_003059Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (414 aa)
I79_003938Lamin-L(I); Belongs to the intermediate filament family. (483 aa)
Adgrb2Brain-specific angiogenesis inhibitor 2; Belongs to the G-protein coupled receptor 2 family. (1540 aa)
Rcc1Regulator of chromosome condensation. (454 aa)
I79_004339Serine/threonine-protein phosphatase. (244 aa)
I79_004627WD repeat-containing protein 41. (319 aa)
I79_004741Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (415 aa)
I79_004909Nucleoporin Nup43. (161 aa)
Vrk2Serine/threonine-protein kinase VRK2. (384 aa)
I79_005438Tubulin alpha chain. (98 aa)
I79_005464Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (239 aa)
I79_005692Importin subunit beta-1. (1894 aa)
Nup37Nucleoporin Nup37. (326 aa)
I79_006178Regulator of chromosome condensation. (161 aa)
Ankle2Ankyrin repeat and LEM domain-containing protein 2. (896 aa)
Ube2iSUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
Asb10Ankyrin repeat and SOCS box protein 10. (1107 aa)
Rbm39RNA-binding protein 39. (524 aa)
Chmp4bCharged multivesicular body protein 4b. (190 aa)
I79_007383Katanin p60 ATPase-containing subunit A-like 2. (308 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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