STRINGSTRING
Pias3 Pias3 Rpa2 Rpa2 Wdr76 Wdr76 I79_002881 I79_002881 I79_002649 I79_002649 Gps1 Gps1 Ercc4 Ercc4 Actr8 Actr8 Cops7a Cops7a I79_001208 I79_001208 Nfrkb Nfrkb I79_001120 I79_001120 Atad5 Atad5 Kctd2 Kctd2 I79_000932 I79_000932 Xpc Xpc Parp1 Parp1 I79_015395 I79_015395 Gtf2h3 Gtf2h3 I79_015813 I79_015813 Rfc4 Rfc4 Cul4b Cul4b Ubc Ubc Actl6a Actl6a I79_017320 I79_017320 Gtf2h1 Gtf2h1 I79_017817 I79_017817 I79_017948 I79_017948 Pold4 Pold4 Ino80e Ino80e CgPICR_012539 CgPICR_012539 Cops6 Cops6 I79_019066 I79_019066 Pold1 Pold1 Nfatc2ip Nfatc2ip I79_019606 I79_019606 I79_019607 I79_019607 H671_1g2978 H671_1g2978 Pold3 Pold3 Rfc3 Rfc3 Cops4 Cops4 Rcbtb1 Rcbtb1 I79_021279 I79_021279 I79_021280 I79_021280 I79_021281 I79_021281 Cops5 Cops5 I79_021404 I79_021404 Ercc5 Ercc5 Polk Polk I79_022617 I79_022617 I79_022618 I79_022618 Pole2 Pole2 CgPICR_012325 CgPICR_012325 I79_023129 I79_023129 Cops8 Cops8 Ddb1 Ddb1 Cetn2 Cetn2 I79_023731 I79_023731 Mcrs1 Mcrs1 I79_024437 I79_024437 I79_024740 I79_024740 Rpap3 Rpap3 I79_025284 I79_025284 Rpa1 Rpa1 Ruvbl1 Ruvbl1 CgPICR_014540 CgPICR_014540 Rpa3 Rpa3 Cul4a Cul4a Map3k2 Map3k2 Cetn3 Cetn3 I79_011633 I79_011633 Pold2 Pold2 Chd1l Chd1l Ercc2 Ercc2 I79_012652 I79_012652 H671_21027 H671_21027 Ccnh Ccnh Gtf2h4 Gtf2h4 Rcbtb2 Rcbtb2 I79_013580 I79_013580 Cdk7 Cdk7 Ube2n Ube2n Rnf111 Rnf111 Pole3 Pole3 Cops3 Cops3 Gtf2h5 Gtf2h5 Ino80d Ino80d I79_008349 I79_008349 Pole Pole Ube2i Ube2i I79_007437 I79_007437 Vwa5b1 Vwa5b1 Ino80c Ino80c Vtcn1 Vtcn1 Pias1 Pias1 Parp3 Parp3 I79_006285 I79_006285 I79_005093 I79_005093 Pcna Pcna
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Pias3E3 SUMO-protein ligase PIAS3. (619 aa)
Rpa2Replication protein A 32 kDa subunit. (248 aa)
Wdr76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (525 aa)
I79_002881DNA damage-binding protein 2. (294 aa)
I79_002649Actin-related protein 5; Belongs to the actin family. (269 aa)
Gps1COP9 signalosome complex subunit 1. (475 aa)
Ercc4DNA repair endonuclease XPF. (585 aa)
Actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (624 aa)
Cops7aCOP9 signalosome complex subunit 7a. (275 aa)
I79_001208Replication factor C subunit 5. (407 aa)
NfrkbNuclear factor related to kappa-B-binding protein. (747 aa)
I79_001120Nuclear factor related to kappa-B-binding protein. (114 aa)
Atad5ATPase family AAA domain-containing protein 5. (1335 aa)
Kctd2BTB/POZ domain-containing protein KCTD2. (236 aa)
I79_000932Small ubiquitin-related modifier 2. (52 aa)
XpcDNA repair protein complementing XP-C cells-like. (926 aa)
Parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (971 aa)
I79_015395Replication protein A 30 kDa subunit. (333 aa)
Gtf2h3General transcription factor IIH subunit 3. (313 aa)
I79_015813DNA polymerase kappa. (231 aa)
Rfc4Replication factor C subunit 4. (362 aa)
Cul4bCullin-4B; Belongs to the cullin family. (834 aa)
UbcUbiquitin. (430 aa)
Actl6aActin-like protein 6A; Belongs to the actin family. (429 aa)
I79_017320Poly [ADP-ribose] polymerase. (513 aa)
Gtf2h1General transcription factor IIH subunit 1. (547 aa)
I79_017817Von Willebrand factor A domain-containing protein 5B2. (1370 aa)
I79_017948Ubiquitin-conjugating enzyme E2 variant 2. (65 aa)
Pold4DNA polymerase delta subunit 4. (107 aa)
Ino80eINO80 complex subunit E-like protein. (244 aa)
CgPICR_012539Small ubiquitin-related modifier. (112 aa)
Cops6COP9 signalosome complex subunit 6. (343 aa)
I79_019066Actin, cytoplasmic 2. (291 aa)
Pold1DNA polymerase. (1056 aa)
Nfatc2ipNFATC2-interacting protein. (415 aa)
I79_019606WW domain-binding protein 1. (269 aa)
I79_019607INO80 complex subunit B protein. (330 aa)
H671_1g2978Putative zinc finger protein 42 like protein. (299 aa)
Pold3DNA polymerase delta subunit 3. (462 aa)
Rfc3Replication factor C subunit 3. (356 aa)
Cops4COP9 signalosome complex subunit 4. (406 aa)
Rcbtb1RCC1 and BTB domain-containing protein 1. (531 aa)
I79_021279Von Willebrand factor A domain-containing protein 5A. (706 aa)
I79_021280Von Willebrand factor A domain-containing protein 5A. (729 aa)
I79_021281Von Willebrand factor A domain-containing protein 5A. (832 aa)
Cops5COP9 signalosome complex subunit 5. (327 aa)
I79_021404Putative DNA helicase INO80 complex-like 1. (1058 aa)
Ercc5DNA repair protein complementing XP-G cells-like. (1028 aa)
PolkDNA polymerase kappa. (440 aa)
I79_022617Von Willebrand factor A domain-containing protein 5A. (603 aa)
I79_022618Von Willebrand factor A domain-containing protein 5A. (184 aa)
Pole2DNA polymerase epsilon subunit 2. (320 aa)
CgPICR_012325Small ubiquitin-related modifier. (95 aa)
I79_023129COP9 signalosome complex subunit 7b. (264 aa)
Cops8COP9 signalosome complex subunit 8. (209 aa)
Ddb1DNA damage-binding protein 1. (1140 aa)
Cetn2Centrin-2. (172 aa)
I79_023731Replication factor C subunit 1. (1065 aa)
Mcrs1Microspherule protein 1. (462 aa)
I79_024437Enterin neuropeptides. (161 aa)
I79_024740Von Willebrand factor A domain-containing protein 5A. (530 aa)
Rpap3RNA polymerase II-associated protein 3. (636 aa)
I79_025284Von Willebrand factor A domain-containing protein 5A. (721 aa)
Rpa1Replication protein A 70 kDa DNA-binding subunit. (209 aa)
Ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
CgPICR_014540Centrin-2-like protein. (163 aa)
Rpa3Replication protein A subunit-like protein. (121 aa)
Cul4aCullin-4A; Belongs to the cullin family. (582 aa)
Map3k2TFIIH basal transcription factor complex helicase XPB subunit. (1183 aa)
Cetn3Centrin-3. (167 aa)
I79_011633Replication factor C subunit 2. (293 aa)
Pold2DNA polymerase delta subunit 2. (487 aa)
Chd1lChromodomain-helicase-DNA-binding protein 1-like. (810 aa)
Ercc2TFIIH basal transcription factor complex helicase subunit. (141 aa)
I79_012652TFIIH basal transcription factor complex helicase subunit. (108 aa)
H671_21027DNA excision repair protein ERCC-1. (111 aa)
CcnhCyclin-H; Belongs to the cyclin family. (323 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
Rcbtb2RCC1 and BTB domain-containing protein 2. (551 aa)
I79_013580General transcription factor IIH subunit. (395 aa)
Cdk7Cell division protein kinase 7; Belongs to the protein kinase superfamily. (346 aa)
Ube2nUbiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
Rnf111E3 ubiquitin-protein ligase Arkadia. (990 aa)
Pole3DNA polymerase epsilon subunit 3. (146 aa)
Cops3COP9 signalosome complex subunit 3. (394 aa)
Gtf2h5General transcription factor IIH subunit 5. (71 aa)
Ino80dINO80 complex subunit D protein. (1021 aa)
I79_008349UV excision repair protein RAD23-like A. (316 aa)
PoleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2174 aa)
Ube2iSUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
I79_007437V-set domain-containing T-cell activation inhibitor 1. (242 aa)
Vwa5b1Von Willebrand factor A domain-containing protein 5B1. (1215 aa)
Ino80cINO80 complex subunit C protein. (134 aa)
Vtcn1V-set domain containing T-cell activation inhibitor 1. (206 aa)
Pias1E3 SUMO-protein ligase PIAS1. (642 aa)
Parp3Poly [ADP-ribose] polymerase. (527 aa)
I79_006285DNA repair protein complementing XP-A cells-like. (231 aa)
I79_005093UPF0459 protein C19orf50-like. (207 aa)
PcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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