STRINGSTRING
Tmtc4 Tmtc4 Gtf2a2 Gtf2a2 Ncbp2 Ncbp2 Ccnq Ccnq I79_001456 I79_001456 I79_001601 I79_001601 Pou6f2 Pou6f2 Ints1 Ints1 Rprd1b Rprd1b Polr2a Polr2a I79_002824 I79_002824 Ccnt2 Ccnt2 Zc3h8 Zc3h8 Ints9 Ints9 Ints6 Ints6 I79_003761 I79_003761 Rprd2 Rprd2 Tmtc2 Tmtc2 Ell Ell I79_005652 I79_005652 Gtf2e2 Gtf2e2 Ints6l Ints6l I79_006076 I79_006076 Ell2 Ell2 I79_006282 I79_006282 Gtf2f2 Gtf2f2 Snapc5 Snapc5 CgPICR_007098 CgPICR_007098 Gtf2e1 Gtf2e1 Ints3 Ints3 Ice1 Ice1 I79_008116 I79_008116 Gtf2f1 Gtf2f1 I79_008847 I79_008847 Rpap2 Rpap2 Polr2e Polr2e I79_010281 I79_010281 Tmtc3 Tmtc3 Ccnk Ccnk I79_010679 I79_010679 Supt4h1 Supt4h1 Supt5h Supt5h CgPICR_021944 CgPICR_021944 Tbp Tbp Tmtc1 Tmtc1 Taf8 Taf8 Nabp2 Nabp2 Snapc2 Snapc2 Cdk7 Cdk7 Znf76 Znf76 Taf11 Taf11 Polr2k Polr2k Pcf11 Pcf11 Ints14 Ints14 Cdk9 Cdk9 Sp1 Sp1 Snapc1 Snapc1 Ints5 Ints5 I79_016914 I79_016914 Ints13 Ints13 I79_017042 I79_017042 Polr2h Polr2h Polr2l Polr2l Polr2c Polr2c Ints11 Ints11 Tmem240 Tmem240 Ssu72 Ssu72 Fndc10 Fndc10 Gtf2b Gtf2b Polr2f Polr2f Ints4 Ints4 Taf6 Taf6 I79_018795 I79_018795 I79_018796 I79_018796 CgPICR_017319 CgPICR_017319 H671_7g18211 H671_7g18211 Polr2d Polr2d Snapc4 Snapc4 Znf143 Znf143 Polr2b Polr2b Tbpl1 Tbpl1 I79_020821 I79_020821 Nabp1 Nabp1 Taf13 Taf13 CgPICR_018980 CgPICR_018980 I79_021679 I79_021679 Pou2f3 Pou2f3 I79_023004 I79_023004 I79_023264 I79_023264 Pou6f1 Pou6f1 Ints12 Ints12 Ccnt1 Ccnt1 I79_025287 I79_025287
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tmtc4Transmembrane and TPR repeat-containing protein 4. (741 aa)
Gtf2a2Transcription initiation factor IIA subunit 2. (63 aa)
Ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
CcnqCyclin-related protein FAM58A; Belongs to the cyclin family. (214 aa)
I79_001456Coiled-coil domain-containing protein 66. (782 aa)
I79_001601POU domain, class 6, transcription factor 2. (160 aa)
Pou6f2POU domain protein. (380 aa)
Ints1Integrator complex subunit 1. (1521 aa)
Rprd1bRegulation of nuclear pre-mRNA domain-containing protein 1B. (326 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (617 aa)
I79_002824DNA-directed RNA polymerase II subunit RPB7. (69 aa)
Ccnt2Cyclin-T2; Belongs to the cyclin family. (724 aa)
Zc3h8Zinc finger CCCH domain-containing protein 8. (306 aa)
Ints9Integrator complex subunit 9. (551 aa)
Ints6Integrator complex subunit 6. (811 aa)
I79_003761RNA polymerase II elongation factor ELL3. (299 aa)
Rprd2Regulation of nuclear pre-mRNA domain-containing protein 2. (1297 aa)
Tmtc2Transmembrane and TPR repeat-containing protein 2. (591 aa)
EllRNA polymerase II elongation factor ELL. (545 aa)
I79_005652TFIIA-alpha and beta-like factor. (387 aa)
Gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
Ints6lProtein DDX26B. (578 aa)
I79_006076Integrator complex subunit 10. (597 aa)
Ell2RNA polymerase II elongation factor ELL2. (507 aa)
I79_006282Nuclear cap-binding protein subunit 1. (581 aa)
Gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
Snapc5snRNA-activating protein complex subunit 5. (97 aa)
CgPICR_007098DNA-directed RNA polymerases I, II, and III subunit RPABC5. (84 aa)
Gtf2e1General transcription factor IIE subunit 1. (438 aa)
Ints3Integrator complex subunit 3. (1041 aa)
Ice1Uncharacterized protein KIAA0947. (3062 aa)
I79_008116snRNA-activating protein complex subunit 3. (238 aa)
Gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (508 aa)
I79_008847POU domain protein. (621 aa)
Rpap2RNA polymerase II-associated protein 2. (607 aa)
Polr2eDNA-directed RNA polymerases I, II, and III subunit RPABC1. (218 aa)
I79_010281Integrator complex subunit 8. (855 aa)
Tmtc3Transmembrane and TPR repeat-containing protein 3. (916 aa)
CcnkCyclin-K; Belongs to the cyclin family. (492 aa)
I79_010679DNA-directed RNA polymerases I, II, and III subunit RPABC1. (112 aa)
Supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
Supt5hTranscription elongation factor SPT5. (944 aa)
CgPICR_021944RNA polymerase II subunit A domain phosphatase SSU72-like protein. (194 aa)
TbpTATA-box-binding protein. (315 aa)
Tmtc1Transmembrane and TPR repeat-containing protein 1. (266 aa)
Taf8Transcription initiation factor TFIID subunit 8. (308 aa)
Nabp2SOSS complex subunit B1. (211 aa)
Snapc2snRNA-activating protein complex subunit 2. (252 aa)
Cdk7Cell division protein kinase 7; Belongs to the protein kinase superfamily. (346 aa)
Znf76Zinc finger protein 76. (570 aa)
Taf11Transcription initiation factor TFIID subunit 11. (106 aa)
Polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
Pcf11Pre-mRNA cleavage complex 2 protein Pcf11. (1611 aa)
Ints14UPF0464 protein C15orf44. (518 aa)
Cdk9Cell division protein kinase 9; Belongs to the protein kinase superfamily. (372 aa)
Sp1Transcription factor Sp1. (778 aa)
Snapc1snRNA-activating protein complex subunit 1. (389 aa)
Ints5Integrator complex subunit 5. (1019 aa)
I79_016914POU domain, class 2, transcription factor 2. (116 aa)
Ints13Cell cycle regulator Mat89Bb-like. (706 aa)
I79_017042Zinc finger CCCH domain-containing protein 4. (877 aa)
Polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Polr2lDNA-directed RNA polymerases I, II, and III subunit RPABC5. (109 aa)
Polr2cDNA-directed RNA polymerase II subunit RPB3. (275 aa)
Ints11Integrator complex subunit 11-like protein. (600 aa)
Tmem240Transmembrane protein C1orf70. (67 aa)
Ssu72Uncharacterized protein. (194 aa)
Fndc10Uncharacterized protein. (171 aa)
Gtf2bTranscription initiation factor IIB. (285 aa)
Polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2. (121 aa)
Ints4Integrator complex subunit 4. (964 aa)
Taf6Transcription initiation factor TFIID subunit 6. (678 aa)
I79_018795Integrator complex subunit 7. (108 aa)
I79_018796Integrator complex subunit 7. (652 aa)
CgPICR_017319DNA-directed RNA polymerases I, II, and III subunit RPABC5. (77 aa)
H671_7g18211Integrator complex subunit 2. (857 aa)
Polr2dDNA-directed RNA polymerase II subunit RPB4. (104 aa)
Snapc4snRNA-activating protein complex subunit 4. (1319 aa)
Znf143Zinc finger protein 143. (618 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (807 aa)
Tbpl1TATA box-binding protein-like protein 1. (186 aa)
I79_020821Transcription initiation factor TFIID subunit 5. (416 aa)
Nabp1SOSS complex subunit B2. (198 aa)
Taf13Transcription initiation factor TFIID subunit 13-like protein. (124 aa)
CgPICR_018980Cyclin-K; Belongs to the cyclin family. (573 aa)
I79_021679POU domain protein. (218 aa)
Pou2f3POU domain, class 2, transcription factor 3. (119 aa)
I79_023004Serrate RNA effector molecule-like. (841 aa)
I79_023264POU domain, class 6, transcription factor 1. (78 aa)
Pou6f1Uncharacterized protein. (229 aa)
Ints12Integrator complex subunit 12. (358 aa)
Ccnt1Cyclin-T1; Belongs to the cyclin family. (729 aa)
I79_025287snRNA-activating protein complex subunit 5. (93 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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