STRINGSTRING
Ehmt2 Ehmt2 I79_000274 I79_000274 I79_000801 I79_000801 Chd4 Chd4 Mta3 Mta3 Chd3 Chd3 Polr1b Polr1b Mta1 Mta1 Gatad2a Gatad2a I79_006854 I79_006854 Zbtb8a Zbtb8a Hdac1 Hdac1 I79_006923 I79_006923 I79_006924 I79_006924 CgPICR_007098 CgPICR_007098 I79_007328 I79_007328 I79_007329 I79_007329 Gatad2b Gatad2b Polr2e Polr2e I79_009243 I79_009243 Rrn3 Rrn3 Gtf2h5 Gtf2h5 Ubn2 Ubn2 Hdac2 Hdac2 I79_010679 I79_010679 I79_010857 I79_010857 Rbbp7 Rbbp7 Map3k2 Map3k2 I79_011588 I79_011588 Polr1e Polr1e Tbp Tbp Ercc2 Ercc2 I79_012652 I79_012652 I79_012655 I79_012655 Ccnh Ccnh Gtf2h4 Gtf2h4 I79_013580 I79_013580 Cdk7 Cdk7 I79_013777 I79_013777 Taf1d Taf1d Polr2k Polr2k Polr1h Polr1h Gtf2h3 Gtf2h3 Polr1c Polr1c Mta2 Mta2 I79_017376 I79_017376 Gtf2h1 Gtf2h1 Taf1b Taf1b Polr2h Polr2h I79_017862 I79_017862 Polr2l Polr2l I79_018037 I79_018037 Polr2f Polr2f Dmtf1 Dmtf1 CgPICR_017319 CgPICR_017319 Mbd3l1 Mbd3l1 Polr1a Polr1a Chd5 Chd5 I79_022413 I79_022413 Polr1f Polr1f I79_024881 I79_024881 I79_025003 I79_025003 I79_025229 I79_025229 Ttf1 Ttf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ehmt2Histone-lysine N-methyltransferase, H3 lysine-9 specific 3. (661 aa)
I79_000274TATA box-binding protein-associated factor, RNA polymerase I, subunit C. (848 aa)
I79_000801Histone deacetylase 1. (92 aa)
Chd4Chromodomain-helicase-DNA-binding protein 4. (1930 aa)
Mta3Metastasis-associated protein MTA3. (537 aa)
Chd3Chromodomain-helicase-DNA-binding protein 3. (126 aa)
Polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (996 aa)
Mta1Metastasis-associated protein MTA1. (697 aa)
Gatad2aTranscriptional repressor p66 alpha. (482 aa)
I79_006854Autoimmune regulator. (606 aa)
Zbtb8aHistone-binding protein RBBP4. (527 aa)
Hdac1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (482 aa)
I79_006923Histone deacetylase 1. (235 aa)
I79_006924Histone deacetylase 1. (188 aa)
CgPICR_007098DNA-directed RNA polymerases I, II, and III subunit RPABC5. (84 aa)
I79_007328Histone deacetylase 2. (91 aa)
I79_007329Histone deacetylase 1. (250 aa)
Gatad2bTranscriptional repressor p66-beta. (590 aa)
Polr2eDNA-directed RNA polymerases I, II, and III subunit RPABC1. (218 aa)
I79_009243Methyl-CpG-binding domain protein 3. (229 aa)
Rrn3RNA polymerase I-specific transcription initiation factor RRN3. (224 aa)
Gtf2h5General transcription factor IIH subunit 5. (71 aa)
Ubn2Ubinuclein-2. (530 aa)
Hdac2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (458 aa)
I79_010679DNA-directed RNA polymerases I, II, and III subunit RPABC1. (112 aa)
I79_010857DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (638 aa)
Rbbp7Histone-binding protein RBBP7. (418 aa)
Map3k2TFIIH basal transcription factor complex helicase XPB subunit. (1183 aa)
I79_011588Nucleolar transcription factor 1. (727 aa)
Polr1eDNA-directed RNA polymerase I subunit RPA49. (434 aa)
TbpTATA-box-binding protein. (315 aa)
Ercc2TFIIH basal transcription factor complex helicase subunit. (141 aa)
I79_012652TFIIH basal transcription factor complex helicase subunit. (108 aa)
I79_012655DNA-directed RNA polymerase I subunit RPA34. (332 aa)
CcnhCyclin-H; Belongs to the cyclin family. (323 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
I79_013580General transcription factor IIH subunit. (395 aa)
Cdk7Cell division protein kinase 7; Belongs to the protein kinase superfamily. (346 aa)
I79_013777Histone-binding protein RBBP4. (223 aa)
Taf1dTATA box-binding protein-associated factor RNA polymerase I subunit D. (291 aa)
Polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
Polr1hDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
Gtf2h3General transcription factor IIH subunit 3. (313 aa)
Polr1cDNA-directed RNA polymerases I and III subunit RPAC1. (282 aa)
Mta2Metastasis-associated protein MTA2. (495 aa)
I79_017376Histone-binding protein RBBP7. (290 aa)
Gtf2h1General transcription factor IIH subunit 1. (547 aa)
Taf1bTATA box-binding protein-associated factor RNA polymerase I subunit B. (258 aa)
Polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
I79_017862Histone-binding protein RBBP4. (254 aa)
Polr2lDNA-directed RNA polymerases I, II, and III subunit RPABC5. (109 aa)
I79_018037RNA polymerase I-specific transcription initiation factor RRN3. (202 aa)
Polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2. (121 aa)
Dmtf1Cyclin-D-binding Myb-like transcription factor 1. (760 aa)
CgPICR_017319DNA-directed RNA polymerases I, II, and III subunit RPABC5. (77 aa)
Mbd3l1Methyl-CpG-binding domain protein 3-like 1-like protein. (189 aa)
Polr1aDNA-directed RNA polymerase I subunit RPA1. (980 aa)
Chd5Chromodomain-helicase-DNA-binding protein 5. (999 aa)
I79_022413Transcription termination factor 1. (70 aa)
Polr1fDNA-directed RNA polymerase I subunit RPA43. (169 aa)
I79_024881Cyclin-D-binding Myb-like transcription factor 1. (446 aa)
I79_025003Upstream-binding factor 1-like protein 1. (349 aa)
I79_025229Upstream-binding factor 1-like protein 1. (329 aa)
Ttf1Transcription termination factor 1. (640 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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