STRINGSTRING
I79_025229 I79_025229 I79_013580 I79_013580 Polr2k Polr2k Polr1h Polr1h Cdk7 Cdk7 Gtf2h3 Gtf2h3 Polr2f Polr2f I79_018405 I79_018405 I79_018217 I79_018217 I79_018037 I79_018037 Polr2e Polr2e Rrn3 Rrn3 Gtf2h5 Gtf2h5 Ubn2 Ubn2 I79_010679 I79_010679 I79_010857 I79_010857 I79_010992 I79_010992 Map3k2 Map3k2 I79_011588 I79_011588 Polr1e Polr1e Tbp Tbp Ercc2 Ercc2 I79_012652 I79_012652 I79_012655 I79_012655 Ccnh Ccnh Gtf2h4 Gtf2h4 Polr1c Polr1c Gtf2h1 Gtf2h1 Taf1b Taf1b Polr2h Polr2h Polr2l Polr2l Taf1d Taf1d I79_000274 I79_000274 Polr1b Polr1b I79_005256 I79_005256 CgPICR_007098 CgPICR_007098 I79_008690 I79_008690 CgPICR_017319 CgPICR_017319 Polr1a Polr1a Tbpl1 Tbpl1 CgPICR_009887 CgPICR_009887 Polr1f Polr1f I79_025003 I79_025003
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_025229Upstream-binding factor 1-like protein 1. (329 aa)
I79_013580General transcription factor IIH subunit. (395 aa)
Polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
Polr1hDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
Cdk7Cell division protein kinase 7; Belongs to the protein kinase superfamily. (346 aa)
Gtf2h3General transcription factor IIH subunit 3. (313 aa)
Polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2. (121 aa)
I79_018405Histone H2B type F-M; Belongs to the histone H2B family. (138 aa)
I79_018217Histone H2B type 2-F; Belongs to the histone H2B family. (73 aa)
I79_018037RNA polymerase I-specific transcription initiation factor RRN3. (202 aa)
Polr2eDNA-directed RNA polymerases I, II, and III subunit RPABC1. (218 aa)
Rrn3RNA polymerase I-specific transcription initiation factor RRN3. (224 aa)
Gtf2h5General transcription factor IIH subunit 5. (71 aa)
Ubn2Ubinuclein-2. (530 aa)
I79_010679DNA-directed RNA polymerases I, II, and III subunit RPABC1. (112 aa)
I79_010857DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (638 aa)
I79_010992Histone H2B type 1; Belongs to the histone H2B family. (126 aa)
Map3k2TFIIH basal transcription factor complex helicase XPB subunit. (1183 aa)
I79_011588Nucleolar transcription factor 1. (727 aa)
Polr1eDNA-directed RNA polymerase I subunit RPA49. (434 aa)
TbpTATA-box-binding protein. (315 aa)
Ercc2TFIIH basal transcription factor complex helicase subunit. (141 aa)
I79_012652TFIIH basal transcription factor complex helicase subunit. (108 aa)
I79_012655DNA-directed RNA polymerase I subunit RPA34. (332 aa)
CcnhCyclin-H; Belongs to the cyclin family. (323 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
Polr1cDNA-directed RNA polymerases I and III subunit RPAC1. (282 aa)
Gtf2h1General transcription factor IIH subunit 1. (547 aa)
Taf1bTATA box-binding protein-associated factor RNA polymerase I subunit B. (258 aa)
Polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Polr2lDNA-directed RNA polymerases I, II, and III subunit RPABC5. (109 aa)
Taf1dTATA box-binding protein-associated factor RNA polymerase I subunit D. (291 aa)
I79_000274TATA box-binding protein-associated factor, RNA polymerase I, subunit C. (848 aa)
Polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (996 aa)
I79_005256Uncharacterized protein. (224 aa)
CgPICR_007098DNA-directed RNA polymerases I, II, and III subunit RPABC5. (84 aa)
I79_008690Histone H2B; Belongs to the histone H2B family. (67 aa)
CgPICR_017319DNA-directed RNA polymerases I, II, and III subunit RPABC5. (77 aa)
Polr1aDNA-directed RNA polymerase I subunit RPA1. (980 aa)
Tbpl1TATA box-binding protein-like protein 1. (186 aa)
CgPICR_009887Histone H2B; Belongs to the histone H2B family. (126 aa)
Polr1fDNA-directed RNA polymerase I subunit RPA43. (169 aa)
I79_025003Upstream-binding factor 1-like protein 1. (349 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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