STRINGSTRING
Vps28 Vps28 Zfyve1 Zfyve1 I79_012286 I79_012286 Vps25 Vps25 Snf8 Snf8 Stam Stam Vps36 Vps36 Chmp4b Chmp4b Vps37d Vps37d Mvb12a Mvb12a I79_005093 I79_005093 CgPICR_012593 CgPICR_012593 Hgs Hgs Vps4b Vps4b I79_008539 I79_008539 Tm9sf1 Tm9sf1 I79_001060 I79_001060 I79_016131 I79_016131 Vps37c Vps37c I79_025972 I79_025972 Chmp6 Chmp6 Chmp7 Chmp7 I79_017698 I79_017698 I79_017699 I79_017699 Chmp4c Chmp4c Stam2 Stam2 Ubap1 Ubap1 I79_020616 I79_020616 Chmp5 Chmp5 Vps37b Vps37b Chmp2b Chmp2b Vta1 Vta1 Zfyve19 Zfyve19 Vps4a Vps4a Ubc Ubc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (221 aa)
Zfyve1Zinc finger FYVE domain-containing protein 1. (513 aa)
I79_012286Zinc finger FYVE domain-containing protein 1. (211 aa)
Vps25Vacuolar protein-sorting-associated protein 25. (176 aa)
Snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
StamSignal transducing adapter molecule 1. (132 aa)
Vps36Vacuolar protein-sorting-associated protein 36. (354 aa)
Chmp4bCharged multivesicular body protein 4b. (190 aa)
Vps37dVacuolar protein sorting-associated protein 37D. (185 aa)
Mvb12aMultivesicular body subunit 12A-like protein. (271 aa)
I79_005093UPF0459 protein C19orf50-like. (207 aa)
CgPICR_012593Charged multivesicular body protein 5. (131 aa)
HgsHepatocyte growth factor-regulated tyrosine kinase substrate; Involved in intracellular signal transduction mediated by cytokines and growth factors. When associated with STAM, it suppresses DNA signaling upon stimulation by IL-2 and GM-CSF. Could be a direct effector of PI3-kinase in vesicular pathway via early endosomes and may regulate trafficking to early and late endosomes by recruiting clathrin. May concentrate ubiquitinated receptors within clathrin- coated regions. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with STAM (E [...] (776 aa)
Vps4bVacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (436 aa)
I79_008539Magnesium-dependent phosphatase 1. (160 aa)
Tm9sf1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (606 aa)
I79_001060Protein Njmu-R1. (274 aa)
I79_016131Charged multivesicular body protein 6. (186 aa)
Vps37cVacuolar protein sorting-associated protein 37C. (353 aa)
I79_025972Hepatocyte growth factor-regulated tyrosine kinase substrate. (147 aa)
Chmp6Charged multivesicular body protein 6. (176 aa)
Chmp7Charged multivesicular body protein 7. (449 aa)
I79_017698Charged multivesicular body protein 2a. (51 aa)
I79_017699Charged multivesicular body protein 2a. (72 aa)
Chmp4cCharged multivesicular body protein 4c. (232 aa)
Stam2Signal transducing adapter molecule 2. (523 aa)
Ubap1Ubiquitin-associated protein 1. (499 aa)
I79_020616Charged multivesicular body protein 5. (85 aa)
Chmp5Charged multivesicular body protein 5. (160 aa)
Vps37bVacuolar protein sorting-associated protein 37B. (239 aa)
Chmp2bCharged multivesicular body protein 2b. (202 aa)
Vta1Vacuolar protein sorting-associated protein VTA1-like. (306 aa)
Zfyve19Zinc finger FYVE domain-containing protein 19. (397 aa)
Vps4aVacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family. (437 aa)
UbcUbiquitin. (430 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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