(15 nodes) TGF-beta propeptide network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CgPICR_010134	Left-right determination factor. (365 aa)
	I79_012218	Succinyl-CoA:3-ketoacid-coenzyme A transferase 2A, mitochondrial. (445 aa)
	Bmp10	Bone morphogenetic protein 10. (399 aa)
	Tgfb3	Transforming growth factor beta; Belongs to the TGF-beta family. (410 aa)
	Bmp6	Bone morphogenetic protein 6. (296 aa)
	Bmp7	Bone morphogenetic protein 7. (430 aa)
	I79_006254	Bone morphogenetic protein 4. (406 aa)
	Bmp2	Bone morphogenetic protein 2. (272 aa)
	I79_000120	Bone morphogenetic protein 5. (260 aa)
	I79_000092	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	Gdf11	Growth/differentiation factor 11. (268 aa)
	Mstn	Growth/differentiation factor 8. (295 aa)
	Gdf3	Growth/differentiation factor 3. (361 aa)
	Inhba	Inhibin beta A chain-like protein. (424 aa)
	I79_014841	Left-right determination factor. (368 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bmp10	Bmp6	G3HIB8	G3HD96	Bone morphogenetic protein 10.	Bone morphogenetic protein 6.	0.450
Bmp10	Bmp7	G3HIB8	G3HBL1	Bone morphogenetic protein 10.	Bone morphogenetic protein 7.	0.474
Bmp10	I79_000120	G3HIB8	G3GRH3	Bone morphogenetic protein 10.	Bone morphogenetic protein 5.	0.440
Bmp10	I79_006254	G3HIB8	G3H7C4	Bone morphogenetic protein 10.	Bone morphogenetic protein 4.	0.477
Bmp2	Bmp6	G3GSC2	G3HD96	Bone morphogenetic protein 2.	Bone morphogenetic protein 6.	0.908
Bmp2	I79_006254	G3GSC2	G3H7C4	Bone morphogenetic protein 2.	Bone morphogenetic protein 4.	0.650
Bmp6	Bmp10	G3HD96	G3HIB8	Bone morphogenetic protein 6.	Bone morphogenetic protein 10.	0.450
Bmp6	Bmp2	G3HD96	G3GSC2	Bone morphogenetic protein 6.	Bone morphogenetic protein 2.	0.908
Bmp6	I79_006254	G3HD96	G3H7C4	Bone morphogenetic protein 6.	Bone morphogenetic protein 4.	0.663
Bmp7	Bmp10	G3HBL1	G3HIB8	Bone morphogenetic protein 7.	Bone morphogenetic protein 10.	0.474
Bmp7	I79_006254	G3HBL1	G3H7C4	Bone morphogenetic protein 7.	Bone morphogenetic protein 4.	0.808
CgPICR_010134	I79_014841	G3HV62	G3HV64	Left-right determination factor.	Left-right determination factor.	0.922
CgPICR_010134	Tgfb3	G3HV62	G3HFS5	Left-right determination factor.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.927
I79_000092	Tgfb3	G3GRE7	G3HFS5	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.722
I79_000120	Bmp10	G3GRH3	G3HIB8	Bone morphogenetic protein 5.	Bone morphogenetic protein 10.	0.440
I79_000120	I79_006254	G3GRH3	G3H7C4	Bone morphogenetic protein 5.	Bone morphogenetic protein 4.	0.655
I79_006254	Bmp10	G3H7C4	G3HIB8	Bone morphogenetic protein 4.	Bone morphogenetic protein 10.	0.477
I79_006254	Bmp2	G3H7C4	G3GSC2	Bone morphogenetic protein 4.	Bone morphogenetic protein 2.	0.650
I79_006254	Bmp6	G3H7C4	G3HD96	Bone morphogenetic protein 4.	Bone morphogenetic protein 6.	0.663
I79_006254	Bmp7	G3H7C4	G3HBL1	Bone morphogenetic protein 4.	Bone morphogenetic protein 7.	0.808