STRINGSTRING
Ptchd4 Ptchd4 I79_016206 I79_016206 Disp1 Disp1 Ptch2 Ptch2 I79_014078 I79_014078 Npc1l1 Npc1l1 Ptchd3 Ptchd3 Ptch1 Ptch1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ptchd4Patched domain-containing protein C6orf138. (510 aa)
I79_016206Patched domain-containing protein C6orf138. (207 aa)
Disp1Protein dispatched-like 1. (1551 aa)
Ptch2Protein patched-like 2. (1176 aa)
I79_014078Niemann-Pick C1 protein. (1137 aa)
Npc1l1Niemann-Pick C1-like protein 1. (1328 aa)
Ptchd3Patched domain-containing protein 3. (343 aa)
Ptch1Protein patched-like 1. (1114 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.