(14 nodes) (2010) Development of an acute and highly pathogenic nonhuman primate model of Nipah virus infection. network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_001024	Ephrin-B2; Belongs to the ephrin family. (373 aa)
	I79_026231	Ephrin-B2; Belongs to the ephrin family. (68 aa)
	I79_025726	Ephrin-B2. (121 aa)
	I79_025535	Ephrin-B2. (125 aa)
	I79_025518	Ephrin-B2. (123 aa)
	I79_025497	Ephrin-B2; Belongs to the ephrin family. (69 aa)
	I79_025496	Ephrin-B2. (147 aa)
	I79_025433	Ephrin-B2; Belongs to the ephrin family. (70 aa)
	I79_024975	Ephrin-B2. (148 aa)
	I79_021151	Ephrin-B2. (178 aa)
	Got2	Aspartate aminotransferase. (430 aa)
	I79_013907	Ephrin-B2. (148 aa)
	Pxdn	Peroxidasin-like. (1475 aa)
	Got1	Aspartate aminotransferase. (413 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Got1	Got2	G3GZZ0	G3I2Y1	Aspartate aminotransferase.	Aspartate aminotransferase.	0.985
Got1	Pxdn	G3GZZ0	G3HBI1	Aspartate aminotransferase.	Peroxidasin-like.	0.457
Got2	Got1	G3I2Y1	G3GZZ0	Aspartate aminotransferase.	Aspartate aminotransferase.	0.985
Got2	Pxdn	G3I2Y1	G3HBI1	Aspartate aminotransferase.	Peroxidasin-like.	0.451
I79_025433	I79_025518	G3INB8	G3INJ3	Ephrin-B2; Belongs to the ephrin family.	Ephrin-B2.	0.451
I79_025433	I79_026231	G3INB8	G3IQC0	Ephrin-B2; Belongs to the ephrin family.	Ephrin-B2; Belongs to the ephrin family.	0.495
I79_025518	I79_025433	G3INJ3	G3INB8	Ephrin-B2.	Ephrin-B2; Belongs to the ephrin family.	0.451
I79_026231	I79_025433	G3IQC0	G3INB8	Ephrin-B2; Belongs to the ephrin family.	Ephrin-B2; Belongs to the ephrin family.	0.495
Pxdn	Got1	G3HBI1	G3GZZ0	Peroxidasin-like.	Aspartate aminotransferase.	0.457
Pxdn	Got2	G3HBI1	G3I2Y1	Peroxidasin-like.	Aspartate aminotransferase.	0.451