(15 nodes) (2010) A functional henipavirus envelope glycoprotein pseudotyped lentivirus assay system. network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_025440	Cathepsin L1; Belongs to the peptidase C1 family. (333 aa)
	I79_025433	Ephrin-B2; Belongs to the ephrin family. (70 aa)
	I79_024975	Ephrin-B2. (148 aa)
	I79_021151	Ephrin-B2. (178 aa)
	I79_013907	Ephrin-B2. (148 aa)
	Cxcr4	C-X-C chemokine receptor type 4; Belongs to the G-protein coupled receptor 1 family. (290 aa)
	Agt	Angiotensinogen; Belongs to the serpin family. (477 aa)
	Cd4	T-cell surface glycoprotein CD4. (447 aa)
	I79_001024	Ephrin-B2; Belongs to the ephrin family. (373 aa)
	I79_026231	Ephrin-B2; Belongs to the ephrin family. (68 aa)
	I79_025726	Ephrin-B2. (121 aa)
	I79_025535	Ephrin-B2. (125 aa)
	I79_025518	Ephrin-B2. (123 aa)
	I79_025497	Ephrin-B2; Belongs to the ephrin family. (69 aa)
	I79_025496	Ephrin-B2. (147 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Agt	Cd4	G3GX14	G3GUN9	Angiotensinogen; Belongs to the serpin family.	T-cell surface glycoprotein CD4.	0.509
Agt	Cxcr4	G3GX14	G3GZR2	Angiotensinogen; Belongs to the serpin family.	C-X-C chemokine receptor type 4; Belongs to the G-protein coupled receptor 1 family.	0.921
Agt	I79_025440	G3GX14	G3INC5	Angiotensinogen; Belongs to the serpin family.	Cathepsin L1; Belongs to the peptidase C1 family.	0.426
Cd4	Agt	G3GUN9	G3GX14	T-cell surface glycoprotein CD4.	Angiotensinogen; Belongs to the serpin family.	0.509
Cd4	Cxcr4	G3GUN9	G3GZR2	T-cell surface glycoprotein CD4.	C-X-C chemokine receptor type 4; Belongs to the G-protein coupled receptor 1 family.	0.891
Cd4	I79_025440	G3GUN9	G3INC5	T-cell surface glycoprotein CD4.	Cathepsin L1; Belongs to the peptidase C1 family.	0.560
Cxcr4	Agt	G3GZR2	G3GX14	C-X-C chemokine receptor type 4; Belongs to the G-protein coupled receptor 1 family.	Angiotensinogen; Belongs to the serpin family.	0.921
Cxcr4	Cd4	G3GZR2	G3GUN9	C-X-C chemokine receptor type 4; Belongs to the G-protein coupled receptor 1 family.	T-cell surface glycoprotein CD4.	0.891
I79_025433	I79_025518	G3INB8	G3INJ3	Ephrin-B2; Belongs to the ephrin family.	Ephrin-B2.	0.451
I79_025433	I79_026231	G3INB8	G3IQC0	Ephrin-B2; Belongs to the ephrin family.	Ephrin-B2; Belongs to the ephrin family.	0.495
I79_025440	Agt	G3INC5	G3GX14	Cathepsin L1; Belongs to the peptidase C1 family.	Angiotensinogen; Belongs to the serpin family.	0.426
I79_025440	Cd4	G3INC5	G3GUN9	Cathepsin L1; Belongs to the peptidase C1 family.	T-cell surface glycoprotein CD4.	0.560
I79_025518	I79_025433	G3INJ3	G3INB8	Ephrin-B2.	Ephrin-B2; Belongs to the ephrin family.	0.451
I79_026231	I79_025433	G3IQC0	G3INB8	Ephrin-B2; Belongs to the ephrin family.	Ephrin-B2; Belongs to the ephrin family.	0.495