STRINGSTRING
Bgn Bgn I79_022257 I79_022257 I79_022161 I79_022161 Nrxn2 Nrxn2 Agrn Agrn I79_016980 I79_016980 Dmd Dmd Pomt2 Pomt2 Nrxn3 Nrxn3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BgnBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (369 aa)
I79_022257Actin. (98 aa)
I79_022161Dystrophin. (655 aa)
Nrxn2Neurexin-2-alpha. (56 aa)
AgrnAgrin. (2036 aa)
I79_016980Dystrophin. (193 aa)
DmdDystrophin. (617 aa)
Pomt2Protein O-mannosyl-transferase 2. (646 aa)
Nrxn3Neurexin-3-alpha. (510 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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