STRINGSTRING
Pxdn Pxdn Cdc42 Cdc42 Tbxa2r Tbxa2r Entpd8 Entpd8 Entpd1 Entpd1 I79_022257 I79_022257 Capn1 Capn1 Rhoa Rhoa Itgb3 Itgb3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PxdnPeroxidasin-like. (1475 aa)
Cdc42Cell division control protein 42-like. (191 aa)
Tbxa2rThromboxane A2 receptor-like protein; Belongs to the G-protein coupled receptor 1 family. (339 aa)
Entpd8Ectonucleoside triphosphate diphosphohydrolase 8; Belongs to the GDA1/CD39 NTPase family. (466 aa)
Entpd1Ectonucleoside triphosphate diphosphohydrolase 1; Belongs to the GDA1/CD39 NTPase family. (269 aa)
I79_022257Actin. (98 aa)
Capn1Calpain-1 catalytic subunit; Belongs to the peptidase C2 family. (740 aa)
RhoaTransforming protein RhoA. (193 aa)
Itgb3Integrin beta; Belongs to the integrin beta chain family. (975 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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