(3 nodes) (2012) Systematic applications of metabolomics in metabolic engineering. network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_024784	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (327 aa)
	Pgm2	Phosphoglucomutase-2. (620 aa)
	Taldo1	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (337 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I79_024784	Pgm2	G3ILL5	G3IFE7	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Phosphoglucomutase-2.	0.873
I79_024784	Taldo1	G3ILL5	G3I3G8	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.900
Pgm2	I79_024784	G3IFE7	G3ILL5	Phosphoglucomutase-2.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.873
Pgm2	Taldo1	G3IFE7	G3I3G8	Phosphoglucomutase-2.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.873
Taldo1	I79_024784	G3I3G8	G3ILL5	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.900
Taldo1	Pgm2	G3I3G8	G3IFE7	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Phosphoglucomutase-2.	0.873