STRINGSTRING
Samhd1 Samhd1 Mecp2 Mecp2 Dmd Dmd I79_016980 I79_016980 Fgf4 Fgf4 Pabpc1 Pabpc1 Mov10 Mov10 I79_022161 I79_022161 Acr Acr Runx3 Runx3 Rag2 Rag2 Srp14 Srp14 Rnasel Rnasel Drosha Drosha Glrb Glrb Pcna Pcna Pdhx Pdhx Nr2e3 Nr2e3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Samhd1SAM domain and HD domain-containing protein 1. (670 aa)
Mecp2Methyl-CpG-binding protein 2. (203 aa)
DmdDystrophin. (617 aa)
I79_016980Dystrophin. (193 aa)
Fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (116 aa)
Pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (565 aa)
Mov10Putative helicase MOV-10. (948 aa)
I79_022161Dystrophin. (655 aa)
AcrAcrosin; Belongs to the peptidase S1 family. (286 aa)
Runx3Runt-related transcription factor 3. (299 aa)
Rag2V(D)J recombination-activating protein 2. (527 aa)
Srp14Signal recognition particle 14 kDa protein. (121 aa)
Rnasel2-5A-dependent ribonuclease. (525 aa)
DroshaRibonuclease 3. (1372 aa)
GlrbGlycine receptor subunit beta. (255 aa)
PcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
PdhxDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (504 aa)
Nr2e3Photoreceptor-specific nuclear receptor. (395 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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