STRINGSTRING
Lyrm9 Lyrm9 Nos1 Nos1 Cd4 Cd4 Ifng Ifng Ctsb Ctsb I79_004996 I79_004996 Calr3 Calr3 Il10 Il10 I79_007693 I79_007693 Calr Calr CgPICR_005523 CgPICR_005523 I79_012448 I79_012448 Canx Canx I79_017439 I79_017439 Il33 Il33 I79_025440 I79_025440
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Lyrm9Nitric oxide synthase; Produces nitric oxide (NO); Belongs to the complex I LYR family. (1115 aa)
Nos1Nitric oxide synthase; Produces nitric oxide (NO). (1413 aa)
Cd4T-cell surface glycoprotein CD4. (447 aa)
IfngInterferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons. (157 aa)
CtsbCathepsin B; Belongs to the peptidase C1 family. (339 aa)
I79_004996Triosephosphate isomerase. (83 aa)
Calr3Calreticulin. (380 aa)
Il10Interleukin-10. (178 aa)
I79_007693Nitric oxide synthase; Produces nitric oxide (NO). (1129 aa)
CalrCalreticulin. (417 aa)
CgPICR_005523Triosephosphate isomerase. (136 aa)
I79_012448Triosephosphate isomerase. (150 aa)
CanxCalnexin. (591 aa)
I79_017439Triosephosphate isomerase. (187 aa)
Il33Interleukin-33. (217 aa)
I79_025440Cathepsin L1; Belongs to the peptidase C1 family. (333 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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