(11 nodes) (2018) Biological Clocks and Rhythms of Anger and Aggression. network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Per2	Period circadian protein-like 2. (1262 aa)
	I79_018852	Amino acid transporter. (158 aa)
	Clock	Circadian locomoter output cycles protein kaput. (599 aa)
	Cry1	Cryptochrome-1. (428 aa)
	Slc1a6	Amino acid transporter. (562 aa)
	Slc1a3	Amino acid transporter. (529 aa)
	I79_005358	Estrogen receptor beta. (58 aa)
	Slc1a2	Amino acid transporter. (553 aa)
	Cry2	Cryptochrome-2. (577 aa)
	I79_001019	Amino acid transporter. (596 aa)
	Slc1a1	Amino acid transporter. (492 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Clock	Cry1	G3I9K3	G3HNX1	Circadian locomoter output cycles protein kaput.	Cryptochrome-1.	0.999
Clock	Cry2	G3I9K3	G3GYH7	Circadian locomoter output cycles protein kaput.	Cryptochrome-2.	0.999
Clock	I79_005358	G3I9K3	G3H4Z4	Circadian locomoter output cycles protein kaput.	Estrogen receptor beta.	0.485
Clock	Per2	G3I9K3	G3I244	Circadian locomoter output cycles protein kaput.	Period circadian protein-like 2.	0.993
Cry1	Clock	G3HNX1	G3I9K3	Cryptochrome-1.	Circadian locomoter output cycles protein kaput.	0.999
Cry1	Cry2	G3HNX1	G3GYH7	Cryptochrome-1.	Cryptochrome-2.	0.993
Cry1	Per2	G3HNX1	G3I244	Cryptochrome-1.	Period circadian protein-like 2.	0.999
Cry2	Clock	G3GYH7	G3I9K3	Cryptochrome-2.	Circadian locomoter output cycles protein kaput.	0.999
Cry2	Cry1	G3GYH7	G3HNX1	Cryptochrome-2.	Cryptochrome-1.	0.993
Cry2	Per2	G3GYH7	G3I244	Cryptochrome-2.	Period circadian protein-like 2.	0.999
I79_005358	Clock	G3H4Z4	G3I9K3	Estrogen receptor beta.	Circadian locomoter output cycles protein kaput.	0.485
Per2	Clock	G3I244	G3I9K3	Period circadian protein-like 2.	Circadian locomoter output cycles protein kaput.	0.993
Per2	Cry1	G3I244	G3HNX1	Period circadian protein-like 2.	Cryptochrome-1.	0.999
Per2	Cry2	G3I244	G3GYH7	Period circadian protein-like 2.	Cryptochrome-2.	0.999
Slc1a1	Slc1a6	G3HS16	G3HM47	Amino acid transporter.	Amino acid transporter.	0.914
Slc1a2	Slc1a3	G3GYZ2	G3HJU8	Amino acid transporter.	Amino acid transporter.	0.905
Slc1a3	Slc1a2	G3HJU8	G3GYZ2	Amino acid transporter.	Amino acid transporter.	0.905
Slc1a6	Slc1a1	G3HM47	G3HS16	Amino acid transporter.	Amino acid transporter.	0.914