STRINGSTRING
Mdc1 Mdc1 Cdk1 Cdk1 Bard1 Bard1 Hus1 Hus1 Tnf Tnf Plk1 Plk1 Ccnd1 Ccnd1 Casp8 Casp8 Esr1 Esr1 I79_001487 I79_001487 Hus1b Hus1b Fancd2 Fancd2 Sirt1 Sirt1 Ccna1 Ccna1 Cdc25a Cdc25a Brca1 Brca1 Brca2 Brca2 CgPICR_018825 CgPICR_018825
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mdc1Mediator of DNA damage checkpoint protein 1. (1490 aa)
Cdk1Cell division control protein 2-like; Belongs to the protein kinase superfamily. (297 aa)
Bard1BRCA1-associated RING domain protein 1. (670 aa)
Hus1Checkpoint protein; Belongs to the HUS1 family. (281 aa)
TnfTumor necrosis factor; Belongs to the tumor necrosis factor family. (234 aa)
Plk1Serine/threonine-protein kinase PLK. (602 aa)
Ccnd1G1/S-specific cyclin-D1; Belongs to the cyclin family. (295 aa)
Casp8Caspase-8; Belongs to the peptidase C14A family. (481 aa)
Esr1Estrogen receptor. (200 aa)
I79_001487Progesterone receptor. (741 aa)
Hus1bCheckpoint protein; Belongs to the HUS1 family. (277 aa)
Fancd2Fanconi anemia group D2 protein-like. (1068 aa)
Sirt1NAD-dependent deacetylase sirtuin-1. (554 aa)
Ccna1Cyclin-A1; Belongs to the cyclin family. (351 aa)
Cdc25aM-phase inducer phosphatase 1. (121 aa)
Brca1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1790 aa)
Brca2Breast cancer type 2 susceptibility protein-like. (3008 aa)
CgPICR_018825Cell division protein kinase 4. (121 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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