STRINGSTRING
I79_001171 I79_001171 I79_001170 I79_001170 Syne1 Syne1 I79_011045 I79_011045 Cttn Cttn Cdc42 Cdc42 Lbr Lbr Lmna Lmna Lmnb2 Lmnb2 Sun1 Sun1 Sun2 Sun2 Pick1 Pick1 Tsga10 Tsga10 Rnf19a Rnf19a I79_022257 I79_022257 Psmc3 Psmc3 Pfn4 Pfn4 Tnp1 Tnp1 H1-6 H1-6 I79_000133 I79_000133 Sun5 Sun5 Spem1 Spem1 I79_001487 I79_001487
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_001171Nesprin-1. (1173 aa)
I79_001170Nesprin-1. (1360 aa)
Syne1Nesprin-1. (1959 aa)
I79_011045Afadin. (1605 aa)
CttnSrc substrate cortactin. (550 aa)
Cdc42Cell division control protein 42-like. (191 aa)
LbrLamin-B receptor. (619 aa)
LmnaLamin-A/C; Belongs to the intermediate filament family. (563 aa)
Lmnb2Lamin-B2; Belongs to the intermediate filament family. (602 aa)
Sun1Protein unc-84-like A. (916 aa)
Sun2Protein unc-84-like B. (730 aa)
Pick1PRKCA-binding protein. (416 aa)
Tsga10Testis-specific gene 10 protein. (383 aa)
Rnf19aRBR-type E3 ubiquitin transferase. (711 aa)
I79_022257Actin. (98 aa)
Psmc326S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (265 aa)
Pfn4Profilin-4; Belongs to the profilin family. (110 aa)
Tnp1Spermatid nuclear transition protein 1. (109 aa)
H1-6Histone H1t. (150 aa)
I79_000133Myosin-Va; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1737 aa)
Sun5Sperm-associated antigen 4-like protein. (245 aa)
Spem1Spermatid maturation protein 1. (311 aa)
I79_001487Progesterone receptor. (741 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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