Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFE42782.1 | SFF04848.1 | SAMN04488541_1001154 | SAMN04488541_10149 | 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase). | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.640 |
| SFE64835.1 | SFE93272.1 | SAMN04488541_1004151 | SAMN04488541_101065 | Thioredoxin reductase (NADPH). | Thioredoxin; Belongs to the thioredoxin family. | 0.979 |
| SFE64835.1 | SFE93352.1 | SAMN04488541_1004151 | SAMN04488541_101068 | Thioredoxin reductase (NADPH). | Bacillithiol system protein YtxJ. | 0.546 |
| SFE64835.1 | SFF00072.1 | SAMN04488541_1004151 | SAMN04488541_101278 | Thioredoxin reductase (NADPH). | Thioredoxin. | 0.919 |
| SFE64835.1 | SFF26326.1 | SAMN04488541_1004151 | SAMN04488541_102271 | Thioredoxin reductase (NADPH). | Peroxiredoxin. | 0.504 |
| SFE64835.1 | SFF40556.1 | SAMN04488541_1004151 | SAMN04488541_103151 | Thioredoxin reductase (NADPH). | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.878 |
| SFE64835.1 | SFF50397.1 | SAMN04488541_1004151 | SAMN04488541_104320 | Thioredoxin reductase (NADPH). | Thioredoxin. | 0.787 |
| SFE84124.1 | SFF18471.1 | SAMN04488541_100812 | SAMN04488541_101933 | Hypothetical protein. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.912 |
| SFE84124.1 | secD | SAMN04488541_100812 | SAMN04488541_100543 | Hypothetical protein. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.845 |
| SFE84124.1 | secE | SAMN04488541_100812 | SAMN04488541_101977 | Hypothetical protein. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.908 |
| SFE84124.1 | secY | SAMN04488541_100812 | SAMN04488541_102862 | Hypothetical protein. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.918 |
| SFE90262.1 | SFF18471.1 | SAMN04488541_1009103 | SAMN04488541_101933 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.632 |
| SFE90262.1 | rpoA | SAMN04488541_1009103 | SAMN04488541_102857 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SFE90262.1 | rpoB | SAMN04488541_1009103 | SAMN04488541_10073 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SFE90262.1 | rpoC | SAMN04488541_1009103 | SAMN04488541_101368 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SFE93272.1 | SFE64835.1 | SAMN04488541_101065 | SAMN04488541_1004151 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin reductase (NADPH). | 0.979 |
| SFE93272.1 | SFF32074.1 | SAMN04488541_101065 | SAMN04488541_102570 | Thioredoxin; Belongs to the thioredoxin family. | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.459 |
| SFE93272.1 | SFF34382.1 | SAMN04488541_101065 | SAMN04488541_102725 | Thioredoxin; Belongs to the thioredoxin family. | Arsenate reductase. | 0.459 |
| SFE93272.1 | SFF40556.1 | SAMN04488541_101065 | SAMN04488541_103151 | Thioredoxin; Belongs to the thioredoxin family. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.486 |
| SFE93272.1 | SFF58352.1 | SAMN04488541_101065 | SAMN04488541_10685 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin reductase (NADPH). | 0.730 |
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