STRINGSTRING
Snrnp200 Snrnp200 Ddx23 Ddx23 Prpf6 Prpf6 Prpf8 Prpf8 Snrnp40 Snrnp40 Eftud2 Eftud2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snrnp200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
Ddx23Probable ATP-dependent RNA helicase DDX23. (818 aa)
Prpf6pre-mRNA-processing factor 6. (941 aa)
Prpf8pre-mRNA-processing-splicing factor 8. (322 aa)
Snrnp40U5 small nuclear ribonucleoprotein 40 kDa protein. (360 aa)
Eftud2116 kDa U5 small nuclear ribonucleoprotein component isoform X1. (972 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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