STRINGSTRING
ENSMAUP00000000019 ENSMAUP00000000019 ENSMAUP00000000106 ENSMAUP00000000106 Dhx36 Dhx36 D1Pas1 D1Pas1 Smg1 Smg1 Aen Aen Acin1 Acin1 Eif4a2 Eif4a2 Eif4h Eif4h Ptbp3 Ptbp3 ENSMAUP00000000889 ENSMAUP00000000889 Hnrnpc Hnrnpc ENSMAUP00000001034 ENSMAUP00000001034 LOC101832437 LOC101832437 ENSMAUP00000001644 ENSMAUP00000001644 Ythdc1 Ythdc1 LOC101826350 LOC101826350 Larp1 Larp1 ENSMAUP00000002107 ENSMAUP00000002107 Hnrnph2 Hnrnph2 Cirbp Cirbp Thoc7 Thoc7 Thoc2 Thoc2 Tra2b Tra2b Pabpc6 Pabpc6 Pabpc1 Pabpc1 ENSMAUP00000003314 ENSMAUP00000003314 Msi2 Msi2 Rnps1 Rnps1 ENSMAUP00000003614 ENSMAUP00000003614 Raver2 Raver2 LOC101829351 LOC101829351 ENSMAUP00000004100 ENSMAUP00000004100 Safb Safb Sap18 Sap18 Sarnp Sarnp Raly Raly Hnrnpa2b1 Hnrnpa2b1 Casc3 Casc3 Pcbp3 Pcbp3 Magohb Magohb Pym1 Pym1 Pabpn1 Pabpn1 ENSMAUP00000005745 ENSMAUP00000005745 Hnrnpf Hnrnpf Syncrip Syncrip Ddx39b Ddx39b ENSMAUP00000006105 ENSMAUP00000006105 ENSMAUP00000006156 ENSMAUP00000006156 Ptbp1 Ptbp1 Ddx39a Ddx39a Rbm11 Rbm11 ENSMAUP00000006800 ENSMAUP00000006800 Hnrnpl Hnrnpl ENSMAUP00000006881 ENSMAUP00000006881 Upf3b Upf3b ENSMAUP00000006919 ENSMAUP00000006919 CUNH12orf50 CUNH12orf50 Hnrnpd Hnrnpd Srsf11 Srsf11 Hnrnpu Hnrnpu Rsrc2 Rsrc2 LOC101833993 LOC101833993 Srpk1 Srpk1 Dhx29 Dhx29 Eif4g3 Eif4g3 Rspry1 Rspry1 Celf1 Celf1 Srsf5 Srsf5 Srpk2 Srpk2 Fus Fus ENSMAUP00000008380 ENSMAUP00000008380 ENSMAUP00000008398 ENSMAUP00000008398 Pcbp1 Pcbp1 Rbm46 Rbm46 Srpk3 Srpk3 Srek1 Srek1 LOC101838729 LOC101838729 Thoc1 Thoc1 Smg5 Smg5 Fyttd1 Fyttd1 Zranb2 Zranb2 Hnrnpdl Hnrnpdl LOC101838253 LOC101838253 Ddx21 Ddx21 Thoc3 Thoc3 ENSMAUP00000010327 ENSMAUP00000010327 Srsf9 Srsf9 ENSMAUP00000010589 ENSMAUP00000010589 Upf1 Upf1 Srsf3 Srsf3 Safb2 Safb2 Pdcd4 Pdcd4 Pnisr Pnisr Ddx51 Ddx51 Dazap1 Dazap1 Zfp830 Zfp830 Ybx3 Ybx3 Eif4g2 Eif4g2 Pan2 Pan2 ENSMAUP00000012377 ENSMAUP00000012377 Eif4a3 Eif4a3 Hnrnph1 Hnrnph1 Hnrnpul2 Hnrnpul2 Tnpo3 Tnpo3 Hnrnpr Hnrnpr Poldip3 Poldip3 ENSMAUP00000014169 ENSMAUP00000014169 Pabpn1l Pabpn1l Tprg Tprg Il31ra Il31ra Zc3h11a Zc3h11a Paip1 Paip1 Rbm6 Rbm6 LOC101836188 LOC101836188 ENSMAUP00000015601 ENSMAUP00000015601 Znf804a Znf804a ENSMAUP00000015756 ENSMAUP00000015756 Ralyl Ralyl Hnrnpk Hnrnpk Hnrnpa3 Hnrnpa3 Srrm1 Srrm1 Gpr162 Gpr162 Hnrnpll Hnrnpll Magoh Magoh Zfp318 Zfp318 ENSMAUP00000017409 ENSMAUP00000017409 Pabpc4l Pabpc4l ENSMAUP00000017499 ENSMAUP00000017499 Rbm3 Rbm3 ENSMAUP00000017692 ENSMAUP00000017692 Upf2 Upf2 LOC101831331 LOC101831331 Ybx1 Ybx1 Thoc6 Thoc6 Rbm8a Rbm8a Msi1 Msi1 Upf3a Upf3a Smg6 Smg6 U2af1l4 U2af1l4 Srsf7 Srsf7 ENSMAUP00000019072 ENSMAUP00000019072 Rbm14 Rbm14 Hnrnpm Hnrnpm LOC101825865 LOC101825865 ENSMAUP00000019450 ENSMAUP00000019450 Zgrf1 Zgrf1 Srsf12 Srsf12 Raver1 Raver1 Pabpc2 Pabpc2 LOC101829505 LOC101829505 Eif4b Eif4b ENSMAUP00000020346 ENSMAUP00000020346 Hnrnpa0 Hnrnpa0 Chtop Chtop Eif4a1 Eif4a1 Smg8 Smg8 Pcbp2 Pcbp2 Ptbp2 Ptbp2 ENSMAUP00000021312 ENSMAUP00000021312 Prpf38b Prpf38b Hnrnpa1 Hnrnpa1 Srsf10 Srsf10 Smg7 Smg7 Rbmx Rbmx Pabpc4 Pabpc4 Nxf7 Nxf7 Tprg1l Tprg1l LOC106021749 LOC106021749 ENSMAUP00000022912 ENSMAUP00000022912 Dhx9 Dhx9 Hnrnpul1 Hnrnpul1 U2af1 U2af1 Alyref Alyref Tnpo1 Tnpo1 Tia1 Tia1 Csdc2 Csdc2 ENSMAUP00000023853 ENSMAUP00000023853 Pcbp4 Pcbp4 Pan3 Pan3 Rbmxl2 Rbmxl2 Eif4g1 Eif4g1 Srsf1 Srsf1 ENSMAUP00000025347 ENSMAUP00000025347 ENSMAUP00000025369 ENSMAUP00000025369 Srsf4 Srsf4 Pnn Pnn Ddx3x Ddx3x Ybx2 Ybx2 Zc3h14 Zc3h14 Hnrnph3 Hnrnph3 Srsf2 Srsf2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSMAUP00000000019annotation not available (559 aa)
ENSMAUP00000000106annotation not available (289 aa)
Dhx36ATP-dependent RNA helicase DHX36. (999 aa)
D1Pas1Putative ATP-dependent RNA helicase Pl10 isoform X2; Belongs to the DEAD box helicase family. (665 aa)
Smg1Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (2952 aa)
AenApoptosis-enhancing nuclease. (323 aa)
Acin1Apoptotic chromatin condensation inducer 1. (831 aa)
Eif4a2Eukaryotic initiation factor 4A-II isoform X1; Belongs to the DEAD box helicase family. (404 aa)
Eif4hEukaryotic translation initiation factor 4H. (148 aa)
Ptbp3Polypyrimidine tract-binding protein 3. (524 aa)
ENSMAUP00000000889annotation not available (148 aa)
HnrnpcHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (314 aa)
ENSMAUP00000001034annotation not available (243 aa)
LOC101832437RNA-binding protein with serine-rich domain 1. (148 aa)
ENSMAUP00000001644annotation not available (227 aa)
Ythdc1YTH domain-containing protein 1 isoform X1. (733 aa)
LOC101826350Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (212 aa)
Larp1La-related protein 1. (1072 aa)
ENSMAUP00000002107annotation not available (148 aa)
Hnrnph2Heterogeneous nuclear ribonucleoprotein H2. (449 aa)
CirbpCold-inducible RNA-binding protein isoform X2. (172 aa)
Thoc7THO complex subunit 7 homolog isoform X1. (205 aa)
Thoc2THO complex subunit 2 isoform X2. (1594 aa)
Tra2bTransformer-2 protein homolog beta. (182 aa)
Pabpc6poly(A) binding protein, cytoplasmic 6. (638 aa)
Pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (623 aa)
ENSMAUP00000003314annotation not available (266 aa)
Msi2RNA-binding protein Musashi homolog 2 isoform X3. (347 aa)
Rnps1RNA-binding protein with serine-rich domain 1. (128 aa)
ENSMAUP00000003614annotation not available (170 aa)
Raver2Ribonucleoprotein PTB-binding 2. (673 aa)
LOC101829351RNA-binding protein EWS. (643 aa)
ENSMAUP00000004100annotation not available (198 aa)
SafbScaffold attachment factor B1 isoform X1. (486 aa)
Sap18Histone deacetylase complex subunit SAP18. (129 aa)
SarnpSAP domain-containing ribonucleoprotein isoform X2. (210 aa)
RalyRNA-binding protein Raly isoform X1. (211 aa)
Hnrnpa2b1Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1. (353 aa)
Casc3Protein CASC3. (624 aa)
Pcbp3poly(RC)-binding protein 3 isoform X5. (371 aa)
MagohbProtein mago nashi homolog 2. (148 aa)
Pym1Partner of Y14 and mago isoform X4. (203 aa)
Pabpn1Polyadenylate-binding protein 2. (333 aa)
ENSMAUP00000005745annotation not available (285 aa)
HnrnpfHeterogeneous nuclear ribonucleoprotein F. (415 aa)
SyncripSynaptotagmin binding cytoplasmic RNA interacting protein. (512 aa)
Ddx39bSpliceosome RNA helicase DDX39B. (428 aa)
ENSMAUP00000006105annotation not available (189 aa)
ENSMAUP00000006156annotation not available (114 aa)
Ptbp1Polypyrimidine tract-binding protein 1. (545 aa)
Ddx39aATP-dependent RNA helicase DDX39A. (427 aa)
Rbm11Splicing regulator RBM11. (238 aa)
ENSMAUP00000006800annotation not available (133 aa)
HnrnplHeterogeneous nuclear ribonucleoprotein L isoform X2. (586 aa)
ENSMAUP00000006881annotation not available (95 aa)
Upf3bRegulator of nonsense transcripts 3B isoform X1. (482 aa)
ENSMAUP00000006919annotation not available (209 aa)
CUNH12orf50Uncharacterized protein C12orf50 homolog. (195 aa)
HnrnpdHeterogeneous nuclear ribonucleoprotein D0 isoform X1. (352 aa)
Srsf11Serine/arginine-rich splicing factor 11 isoform X1. (500 aa)
HnrnpuHeterogeneous nuclear ribonucleoprotein U. (813 aa)
Rsrc2Arginine/serine-rich coiled-coil protein 2. (203 aa)
LOC101833993Nucleolysin TIAR. (235 aa)
Srpk1SRSF protein kinase 1. (651 aa)
Dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1368 aa)
Eif4g3Eukaryotic translation initiation factor 4 gamma 3. (785 aa)
Rspry1RING finger and SPRY domain-containing protein 1. (576 aa)
Celf1CUGBP Elav-like family member 1 isoform X6. (513 aa)
Srsf5Serine/arginine-rich splicing factor 5 isoform X1. (270 aa)
Srpk2SRSF protein kinase 2 isoform X3. (683 aa)
FusRNA-binding protein FUS isoform X1. (517 aa)
ENSMAUP00000008380annotation not available (68 aa)
ENSMAUP00000008398annotation not available (236 aa)
Pcbp1poly(RC)-binding protein 1. (356 aa)
Rbm46Probable RNA-binding protein 46. (533 aa)
Srpk3SRSF protein kinase 3. (565 aa)
Srek1Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (611 aa)
LOC101838729THO complex subunit 5 homolog isoform X1. (348 aa)
Thoc1THO complex subunit 1. (658 aa)
Smg5Protein SMG5. (1017 aa)
Fyttd1UAP56-interacting factor. (284 aa)
Zranb2Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (330 aa)
HnrnpdlHeterogeneous nuclear ribonucleoprotein D-like isoform X1. (421 aa)
LOC101838253Interleukin-31. (121 aa)
Ddx21Nucleolar RNA helicase 2. (793 aa)
Thoc3THO complex subunit 3. (351 aa)
ENSMAUP00000010327annotation not available (476 aa)
Srsf9Serine/arginine-rich splicing factor 9. (221 aa)
ENSMAUP00000010589annotation not available (151 aa)
Upf1Regulator of nonsense transcripts 1 isoform X2. (1108 aa)
Srsf3Serine/arginine-rich splicing factor 3. (164 aa)
Safb2Scaffold attachment factor B2. (805 aa)
Pdcd4Programmed cell death protein 4. (469 aa)
PnisrArginine/serine-rich protein PNISR isoform X1. (816 aa)
Ddx51ATP-dependent RNA helicase DDX51; Belongs to the DEAD box helicase family. (637 aa)
Dazap1DAZ-associated protein 1 isoform X2. (406 aa)
Zfp830Zinc finger protein 830. (361 aa)
Ybx3Y-box-binding protein 3. (346 aa)
Eif4g2Eukaryotic translation initiation factor 4 gamma 2. (906 aa)
Pan2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1205 aa)
ENSMAUP00000012377annotation not available (137 aa)
Eif4a3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
Hnrnph1Heterogeneous nuclear ribonucleoprotein H isoform X1. (472 aa)
Hnrnpul2Heterogeneous nuclear ribonucleoprotein U-like protein 2 isoform X1. (747 aa)
Tnpo3Transportin-3 isoform X1. (923 aa)
HnrnprHeterogeneous nuclear ribonucleoprotein R isoform X2. (633 aa)
Poldip3Polymerase delta-interacting protein 3. (403 aa)
ENSMAUP00000014169annotation not available (217 aa)
Pabpn1lEmbryonic polyadenylate-binding protein 2 isoform X2. (269 aa)
TprgTumor protein p63-regulated gene 1 protein. (174 aa)
Il31raInterleukin-31 receptor subunit alpha. (715 aa)
Zc3h11aZinc finger CCCH domain-containing protein 11A isoform X1. (84 aa)
Paip1Polyadenylate-binding protein-interacting protein 1. (459 aa)
Rbm6RNA-binding protein 6. (464 aa)
LOC101836188Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (215 aa)
ENSMAUP00000015601annotation not available (310 aa)
Znf804aZinc finger protein 804A. (1193 aa)
ENSMAUP00000015756annotation not available (171 aa)
RalylRNA-binding Raly-like protein. (293 aa)
HnrnpkHeterogeneous nuclear ribonucleoprotein K. (484 aa)
Hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (353 aa)
Srrm1Serine/arginine repetitive matrix protein 1 isoform X1. (932 aa)
Gpr162Probable G-protein coupled receptor 162. (588 aa)
HnrnpllHeterogeneous nuclear ribonucleoprotein L-like. (582 aa)
MagohProtein mago nashi homolog. (146 aa)
Zfp318Zinc finger protein 318. (2116 aa)
ENSMAUP00000017409annotation not available (348 aa)
Pabpc4lPolyadenylate-binding protein 4-like. (370 aa)
ENSMAUP00000017499annotation not available (146 aa)
Rbm3RNA-binding protein 3 isoform X1. (156 aa)
ENSMAUP00000017692annotation not available (308 aa)
Upf2Regulator of nonsense transcripts 2. (1240 aa)
LOC101831331RNA binding motif protein, X-linked-like-1. (388 aa)
Ybx1Nuclease-sensitive element-binding protein 1. (303 aa)
Thoc6THO complex subunit 6 homolog isoform X1. (341 aa)
Rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
Msi1RNA-binding protein Musashi homolog 1. (243 aa)
Upf3aRegulator of nonsense transcripts 3A. (421 aa)
Smg6Telomerase-binding protein EST1A. (231 aa)
U2af1l4Splicing factor U2AF 26 kDa subunit. (220 aa)
Srsf7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
ENSMAUP00000019072annotation not available (157 aa)
Rbm14RNA-binding protein 14 isoform X1. (669 aa)
HnrnpmHeterogeneous nuclear ribonucleoprotein M isoform X1. (730 aa)
LOC101825865Eukaryotic initiation factor 4A-I-like. (173 aa)
ENSMAUP00000019450annotation not available (83 aa)
Zgrf1Protein ZGRF1. (815 aa)
Srsf12Serine/arginine-rich splicing factor 12. (253 aa)
Raver1Ribonucleoprotein PTB-binding 1. (744 aa)
Pabpc2Polyadenylate-binding protein 1-like. (630 aa)
LOC101829505TATA-binding protein-associated factor 2N. (299 aa)
Eif4bEukaryotic translation initiation factor 4B. (599 aa)
ENSMAUP00000020346annotation not available (187 aa)
Hnrnpa0LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A0. (302 aa)
ChtopChromatin target of PRMT1 protein. (249 aa)
Eif4a1Eukaryotic translation initiation factor 4A1. (212 aa)
Smg8Protein SMG8. (991 aa)
Pcbp2poly(RC)-binding protein 2. (339 aa)
Ptbp2Polypyrimidine tract-binding protein 2 isoform X3. (532 aa)
ENSMAUP00000021312annotation not available (135 aa)
Prpf38bpre-mRNA-splicing factor 38B isoform X1. (545 aa)
Hnrnpa1Heterogeneous nuclear ribonucleoprotein A1 isoform X2. (320 aa)
Srsf10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
Smg7Protein SMG7 isoform X3. (1148 aa)
RbmxRNA-binding motif protein, X chromosome isoform X1. (391 aa)
Pabpc4poly(A) binding protein cytoplasmic 4. (474 aa)
Nxf7Nuclear RNA export factor 2. (587 aa)
Tprg1lTumor protein p63-regulated gene 1-like protein. (266 aa)
LOC106021749Eukaryotic initiation factor 4A-I-like. (172 aa)
ENSMAUP00000022912annotation not available (508 aa)
Dhx9ATP-dependent RNA helicase A. (1386 aa)
Hnrnpul1Heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X3. (860 aa)
U2af1Splicing factor U2AF 35 kDa subunit isoform X1. (239 aa)
AlyrefTHO complex subunit 4. (242 aa)
Tnpo1Transportin-1. (898 aa)
Tia1Nucleolysin TIA-1 isoform X2. (387 aa)
Csdc2Cold shock domain-containing protein C2. (152 aa)
ENSMAUP00000023853annotation not available (267 aa)
Pcbp4poly(RC)-binding protein 4 isoform X1. (404 aa)
Pan3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (884 aa)
Rbmxl2RNA-binding motif protein, X-linked-like-2. (313 aa)
Eif4g1Eukaryotic Translation initiation factor 4 gamma 1. (1149 aa)
Srsf1Serine/arginine-rich splicing factor 1. (253 aa)
ENSMAUP00000025347annotation not available (176 aa)
ENSMAUP00000025369annotation not available (201 aa)
Srsf4Serine/arginine-rich splicing factor 4. (490 aa)
PnnPinin. (722 aa)
Ddx3xATP-dependent RNA helicase DDX3X; Belongs to the DEAD box helicase family. (662 aa)
Ybx2Y-box-binding protein 2. (359 aa)
Zc3h14Zinc finger CCCH domain-containing protein 14 isoform X2. (736 aa)
Hnrnph3Heterogeneous nuclear ribonucleoprotein H3 isoform X2. (346 aa)
Srsf2Serine/arginine-rich splicing factor 2. (221 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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