STRINGSTRING
Tbx5 Tbx5 Mesp1 Mesp1 Gata6 Gata6 Gata5 Gata5 Nkx2-5 Nkx2-5 Foxa3 Foxa3 Hand2 Hand2 Lmcd1 Lmcd1 Trmt9b Trmt9b Trps1 Trps1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tbx5T-box transcription factor TBX5. (518 aa)
Mesp1Mesoderm posterior protein 1. (246 aa)
Gata6Transcription factor GATA-6. (442 aa)
Gata5Transcription factor GATA-5. (406 aa)
Nkx2-5Homeobox protein Nkx-2.5. (317 aa)
Foxa3Hepatocyte nuclear factor 3-gamma. (353 aa)
Hand2Heart- and neural crest derivatives-expressed protein 2. (217 aa)
Lmcd1LIM and cysteine-rich domains protein 1. (365 aa)
Trmt9bProbable tRNA methyltransferase 9-like protein isoform X1. (447 aa)
Trps1Zinc finger transcription factor Trps1. (223 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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