STRINGSTRING
Snrpn Snrpn ENSMAUP00000000106 ENSMAUP00000000106 LOC110340020 LOC110340020 Setx Setx Snrnp25 Snrnp25 Sf3b6 Sf3b6 ENSMAUP00000000889 ENSMAUP00000000889 Hnrnpc Hnrnpc LOC101832437 LOC101832437 Snrpe Snrpe Wbp11 Wbp11 Nova1 Nova1 Ubl5 Ubl5 Rbm22 Rbm22 Wdr25 Wdr25 Tdrd6 Tdrd6 ENSMAUP00000001644 ENSMAUP00000001644 Ythdc1 Ythdc1 Rnpc3 Rnpc3 ENSMAUP00000002107 ENSMAUP00000002107 Snrnp35 Snrnp35 Dhx16 Dhx16 Nol3 Nol3 LOC101835567 LOC101835567 Tra2b Tra2b Plrg1 Plrg1 Prpf39 Prpf39 Ddx46 Ddx46 ENSMAUP00000003314 ENSMAUP00000003314 Esrp2 Esrp2 Rnps1 Rnps1 Mbnl1 Mbnl1 ENSMAUP00000004100 ENSMAUP00000004100 Txnl4b Txnl4b Gemin5 Gemin5 Sf3a2 Sf3a2 Hnrnpa2b1 Hnrnpa2b1 Casc3 Casc3 Snrpb2 Snrpb2 Dhx38 Dhx38 ENSMAUP00000004820 ENSMAUP00000004820 Tex16 Tex16 Snrpd1 Snrpd1 Magohb Magohb Htatsf1 Htatsf1 Mthfsd Mthfsd Prpf4b Prpf4b Celf3 Celf3 Ddx39b Ddx39b Lsm5-2 Lsm5-2 Ddx41 Ddx41 ENSMAUP00000006105 ENSMAUP00000006105 U2af2 U2af2 Sf3b5 Sf3b5 Aar2 Aar2 Ppil1 Ppil1 Ddx39a Ddx39a Bud13 Bud13 Ddx5 Ddx5 Snrpa Snrpa Isy1 Isy1 LOC101844346 LOC101844346 Srpk1 Srpk1 Sf3b1 Sf3b1 Cwc25 Cwc25 Zcrb1 Zcrb1 Lsm7 Lsm7 Usp39 Usp39 Celf1 Celf1 ENSMAUP00000007994 ENSMAUP00000007994 Srsf5 Srsf5 Srpk2 Srpk2 Zrsr2 Zrsr2 Celf2 Celf2 ENSMAUP00000008380 ENSMAUP00000008380 Srpk3 Srpk3 Dbr1 Dbr1 Smn1 Smn1 ENSMAUP00000009002 ENSMAUP00000009002 Ddx20 Ddx20 Snu13 Snu13 Dcps Dcps Srsf9 Srsf9 ENSMAUP00000010589 ENSMAUP00000010589 Srsf3 Srsf3 Prpf31 Prpf31 Rbm10 Rbm10 Cactin Cactin Cwc15 Cwc15 Snrnp200 Snrnp200 Usp49 Usp49 Lsm5 Lsm5 Leng8 Leng8 Ddx23 Ddx23 Sart3 Sart3 Prpf40b Prpf40b Prr3 Prr3 Luc7l2 Luc7l2 Rsrc1 Rsrc1 Prpf19 Prpf19 Celf6 Celf6 ENSMAUP00000012377 ENSMAUP00000012377 ENSMAUP00000012407 ENSMAUP00000012407 ENSMAUP00000012642 ENSMAUP00000012642 Lsm3 Lsm3 Eif4a3 Eif4a3 Pqbp1 Pqbp1 Cdc5l Cdc5l Sf3b3 Sf3b3 ENSMAUP00000013721 ENSMAUP00000013721 Smu1 Smu1 Cwf19l2 Cwf19l2 Prmt7 Prmt7 Bcas2 Bcas2 Sf3a3 Sf3a3 Prpf6 Prpf6 Mettl14 Mettl14 Nova2 Nova2 Sf1 Sf1 ENSMAUP00000014248 ENSMAUP00000014248 Srrm2 Srrm2 Mettl3 Mettl3 Puf60 Puf60 Psip1 Psip1 ENSMAUP00000014656 ENSMAUP00000014656 Prpf8 Prpf8 Gemin8 Gemin8 CUNH19orf54 CUNH19orf54 Rbm6 Rbm6 Lsm6 Lsm6 ENSMAUP00000015601 ENSMAUP00000015601 Sf3b4 Sf3b4 Snrpa1 Snrpa1 LOC101842483 LOC101842483 Hnrnpa3 Hnrnpa3 ENSMAUP00000016648 ENSMAUP00000016648 Snip1 Snip1 Tfip11 Tfip11 LOC101824511 LOC101824511 Cwc22 Cwc22 Strap Strap Sart1 Sart1 Paxbp1 Paxbp1 Bud31 Bud31 Rbm41 Rbm41 LOC101831029 LOC101831029 ENSMAUP00000017692 ENSMAUP00000017692 Cwf19l1 Cwf19l1 LOC101831556 LOC101831556 Xab2 Xab2 Scaf11 Scaf11 Zmat2 Zmat2 Luc7l3 Luc7l3 Celf4 Celf4 Slu7 Slu7 Rbm8a Rbm8a Sfswap Sfswap ENSMAUP00000018274 ENSMAUP00000018274 Snw1 Snw1 Rbm4b Rbm4b Sf3b2 Sf3b2 Prpf3 Prpf3 Phf5a Phf5a Esrp1 Esrp1 U2af1l4 U2af1l4 Srsf7 Srsf7 Gemin2 Gemin2 ENSMAUP00000019072 ENSMAUP00000019072 Hnrnpm Hnrnpm Srrm3 Srrm3 Txnl4a-2 Txnl4a-2 ENSMAUP00000019450 ENSMAUP00000019450 Cdk13 Cdk13 Srsf12 Srsf12 Prpf4 Prpf4 LOC101834723 LOC101834723 ENSMAUP00000019942 ENSMAUP00000019942 Luc7l Luc7l Wbp4 Wbp4 Dnajc8 Dnajc8 Gpatch11 Gpatch11 Puf60-2 Puf60-2 Glod4 Glod4 Kdm1a Kdm1a Snrpd2 Snrpd2 Gemin7 Gemin7 Lsm4 Lsm4 Syf2 Syf2 Ptbp2 Ptbp2 Cdc40 Cdc40 ENSMAUP00000021312 ENSMAUP00000021312 Hnrnpa1 Hnrnpa1 Rbmx2 Rbmx2 Lrrc51 Lrrc51 Rbm17 Rbm17 Rbm19 Rbm19 ENSMAUP00000021666 ENSMAUP00000021666 Srsf10 Srsf10 Clns1a Clns1a Khdc4 Khdc4 Yju2 Yju2 Snrpf Snrpf Dhx8 Dhx8 LOC110340397 LOC110340397 Prpf40a Prpf40a ENSMAUP00000023020 ENSMAUP00000023020 Dnajc17 Dnajc17 Ccdc130 Ccdc130 Ppie Ppie Sf3a1 Sf3a1 Celf5 Celf5 Dhx9 Dhx9 Ddx17 Ddx17 U2af1 U2af1 Snrpg Snrpg Rbm5 Rbm5 Ncbp1 Ncbp1 ENSMAUP00000023527 ENSMAUP00000023527 ENSMAUP00000023663 ENSMAUP00000023663 Crnkl1 Crnkl1 ENSMAUP00000023791 ENSMAUP00000023791 ENSMAUP00000023853 ENSMAUP00000023853 Snrnp70 Snrnp70 Scnm1 Scnm1 Aqr Aqr Eftud2 Eftud2 Snrpd3 Snrpd3 Ncbp2 Ncbp2 CUNH9orf78 CUNH9orf78 Srsf1 Srsf1 Txnl4a Txnl4a Gcfc2 Gcfc2 ENSMAUP00000025369 ENSMAUP00000025369 Srsf4 Srsf4 Lsm2 Lsm2 Rbm44 Rbm44 Mfap1 Mfap1 Usp4 Usp4 Srsf2 Srsf2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SnrpnSmall nuclear ribonucleoprotein-associated protein. (240 aa)
ENSMAUP00000000106annotation not available (289 aa)
LOC110340020Small acidic protein. (94 aa)
SetxProbable helicase senataxin. (2604 aa)
Snrnp25U11/U12 small nuclear ribonucleoprotein 25 kDa protein. (122 aa)
Sf3b6Splicing factor 3B subunit 6. (125 aa)
ENSMAUP00000000889annotation not available (148 aa)
HnrnpcHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (314 aa)
LOC101832437RNA-binding protein with serine-rich domain 1. (148 aa)
SnrpeSmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (48 aa)
Wbp11WW domain-binding protein 11. (639 aa)
Nova1RNA-binding protein Nova-1. (121 aa)
Ubl5Ubiquitin-like protein 5. (73 aa)
Rbm22pre-mRNA-splicing factor RBM22. (420 aa)
Wdr25WD repeat-containing protein 25. (534 aa)
Tdrd6Tudor domain-containing protein 6 isoform X1. (2129 aa)
ENSMAUP00000001644annotation not available (227 aa)
Ythdc1YTH domain-containing protein 1 isoform X1. (733 aa)
Rnpc3RNA-binding protein 40. (514 aa)
ENSMAUP00000002107annotation not available (148 aa)
Snrnp35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (246 aa)
Dhx16Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1045 aa)
Nol3Nucleolar protein 3 isoform X2. (206 aa)
LOC101835567U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (105 aa)
Tra2bTransformer-2 protein homolog beta. (182 aa)
Plrg1Pleiotropic regulator 1. (514 aa)
Prpf39pre-mRNA-processing factor 39 isoform X1. (664 aa)
Ddx46Probable ATP-dependent RNA helicase DDX46. (1022 aa)
ENSMAUP00000003314annotation not available (266 aa)
Esrp2Epithelial splicing regulatory protein 2 isoform X1. (717 aa)
Rnps1RNA-binding protein with serine-rich domain 1. (128 aa)
Mbnl1Muscleblind-like protein 1 isoform X2. (387 aa)
ENSMAUP00000004100annotation not available (198 aa)
Txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
Gemin5Gem-associated protein 5 isoform X3. (1499 aa)
Sf3a2Splicing factor 3A subunit 2. (194 aa)
Hnrnpa2b1Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1. (353 aa)
Casc3Protein CASC3. (624 aa)
Snrpb2U2 small nuclear ribonucleoprotein B'. (225 aa)
Dhx38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1046 aa)
ENSMAUP00000004820annotation not available (65 aa)
Tex16Dentin sialophosphoprotein-like. (1133 aa)
Snrpd1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (153 aa)
MagohbProtein mago nashi homolog 2. (148 aa)
Htatsf1HIV Tat-specific factor 1. (746 aa)
MthfsdLOW QUALITY PROTEIN: methenyltetrahydrofolate synthase domain-containing protein. (359 aa)
Prpf4bSerine/threonine-protein kinase PRP4 homolog. (1007 aa)
Celf3CUGBP Elav-like family member 3 isoform X1. (462 aa)
Ddx39bSpliceosome RNA helicase DDX39B. (428 aa)
Lsm5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
Ddx41Probable ATP-dependent RNA helicase DDX41. (622 aa)
ENSMAUP00000006105annotation not available (189 aa)
U2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (468 aa)
Sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
Aar2Protein AAR2 homolog. (384 aa)
Ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
Ddx39aATP-dependent RNA helicase DDX39A. (427 aa)
Bud13BUD13 homolog isoform X3. (587 aa)
Ddx5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (615 aa)
SnrpaU1 small nuclear ribonucleoprotein A. (285 aa)
Isy1pre-mRNA-splicing factor ISY1 homolog. (285 aa)
LOC101844346Small nuclear ribonucleoprotein F-like. (86 aa)
Srpk1SRSF protein kinase 1. (651 aa)
Sf3b1Splicing factor 3B subunit 1. (1264 aa)
Cwc25pre-mRNA-splicing factor CWC25 homolog. (357 aa)
Zcrb1Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (216 aa)
Lsm7U6 snRNA-associated Sm-like protein LSm7 isoform X2. (103 aa)
Usp39U4/U6.U5 tri-snRNP-associated protein 2. (564 aa)
Celf1CUGBP Elav-like family member 1 isoform X6. (513 aa)
ENSMAUP00000007994annotation not available (170 aa)
Srsf5Serine/arginine-rich splicing factor 5 isoform X1. (270 aa)
Srpk2SRSF protein kinase 2 isoform X3. (683 aa)
Zrsr2U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (508 aa)
Celf2CUGBP Elav-like family member 2 isoform X2. (451 aa)
ENSMAUP00000008380annotation not available (68 aa)
Srpk3SRSF protein kinase 3. (565 aa)
Dbr1Lariat debranching enzyme. (543 aa)
Smn1Survival motor neuron protein. (292 aa)
ENSMAUP00000009002annotation not available (76 aa)
Ddx20Probable ATP-dependent RNA helicase DDX20. (826 aa)
Snu13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
Dcpsm7GpppX diphosphatase. (343 aa)
Srsf9Serine/arginine-rich splicing factor 9. (221 aa)
ENSMAUP00000010589annotation not available (151 aa)
Srsf3Serine/arginine-rich splicing factor 3. (164 aa)
Prpf31U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
Rbm10RNA-binding protein 10 isoform X5. (931 aa)
CactinCactin. (799 aa)
Cwc15Spliceosome-associated protein CWC15 homolog. (229 aa)
Snrnp200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
Usp49Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (685 aa)
Lsm5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
Leng8Leukocyte receptor cluster member 8 isoform X5. (801 aa)
Ddx23Probable ATP-dependent RNA helicase DDX23. (818 aa)
Sart3Squamous cell carcinoma antigen recognized by T-cells 3 isoform X2. (955 aa)
Prpf40bpre-mRNA-processing factor 40 homolog B isoform X7. (877 aa)
Prr3Proline-rich protein 3 isoform X1. (194 aa)
Luc7l2Putative RNA-binding protein Luc7-like 2. (316 aa)
Rsrc1serine/Arginine-related protein 53. (334 aa)
Prpf19pre-mRNA-processing factor 19 isoform X1. (523 aa)
Celf6CUGBP Elav-like family member 6 isoform X1. (481 aa)
ENSMAUP00000012377annotation not available (137 aa)
ENSMAUP00000012407annotation not available (102 aa)
ENSMAUP00000012642annotation not available (786 aa)
Lsm3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (58 aa)
Eif4a3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
Pqbp1Polyglutamine-binding protein 1. (100 aa)
Cdc5lCell division cycle 5-like protein. (802 aa)
Sf3b3Splicing factor 3b subunit 3. (906 aa)
ENSMAUP00000013721annotation not available (98 aa)
Smu1WD40 repeat-containing protein SMU1. (513 aa)
Cwf19l2CWF19 like cell cycle control factor 2. (797 aa)
Prmt7Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...] (642 aa)
Bcas2pre-mRNA-splicing factor SPF27 isoform X1. (225 aa)
Sf3a3Splicing factor 3A subunit 3. (317 aa)
Prpf6pre-mRNA-processing factor 6. (941 aa)
Mettl14N6-adenosine-methyltransferase subunit METTL14; Belongs to the MT-A70-like family. (456 aa)
Nova2LOW QUALITY PROTEIN: RNA-binding protein Nova-2. (501 aa)
Sf1Splicing factor 1 isoform X9. (638 aa)
ENSMAUP00000014248annotation not available (118 aa)
Srrm2Serine/arginine repetitive matrix protein 2 isoform X1. (2694 aa)
Mettl3N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family. (580 aa)
Puf60poly(U)-binding-splicing factor PUF60 isoform X1. (408 aa)
Psip1PC4 and SFRS1-interacting protein isoform X3. (332 aa)
ENSMAUP00000014656annotation not available (79 aa)
Prpf8pre-mRNA-processing-splicing factor 8. (322 aa)
Gemin8Gem-associated protein 8. (153 aa)
CUNH19orf54UPF0692 protein C19orf54 homolog isoform X1. (340 aa)
Rbm6RNA-binding protein 6. (464 aa)
Lsm6U6 snRNA-associated Sm-like protein LSm6. (80 aa)
ENSMAUP00000015601annotation not available (310 aa)
Sf3b4Splicing factor 3B subunit 4. (424 aa)
Snrpa1U2 small nuclear ribonucleoprotein A' isoform X1. (255 aa)
LOC101842483U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (85 aa)
Hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (353 aa)
ENSMAUP00000016648annotation not available (95 aa)
Snip1Smad nuclear-interacting protein 1. (387 aa)
Tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)
LOC101824511Splicing factor, suppressor of white-apricot homolog. (127 aa)
Cwc22pre-mRNA-splicing factor CWC22 homolog. (757 aa)
StrapSerine-threonine kinase receptor-associated protein. (350 aa)
Sart1U4/U6.U5 tri-snRNP-associated protein 1 isoform X1. (806 aa)
Paxbp1PAX3- and PAX7-binding protein 1. (810 aa)
Bud31BUD31 homolog. (103 aa)
Rbm41RNA-binding protein 41 isoform X2. (437 aa)
LOC101831029Small nuclear ribonucleoprotein Sm D1-like. (111 aa)
ENSMAUP00000017692annotation not available (308 aa)
Cwf19l1CWF19-like protein 1 isoform X1. (533 aa)
LOC101831556Small nuclear ribonucleoprotein Sm D1-like. (111 aa)
Xab2pre-mRNA-splicing factor SYF1. (855 aa)
Scaf11Protein SCAF11 isoform X2. (1415 aa)
Zmat2Zinc finger matrin-type 2. (190 aa)
Luc7l3Luc7-like protein 3 isoform X1. (490 aa)
Celf4CUGBP Elav-like family member 4. (114 aa)
Slu7pre-mRNA-splicing factor SLU7. (586 aa)
Rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
SfswapSplicing factor, suppressor of white-apricot homolog. (476 aa)
ENSMAUP00000018274annotation not available (74 aa)
Snw1SNW domain-containing protein 1. (536 aa)
Rbm4bRNA-binding protein 4B. (356 aa)
Sf3b2Splicing factor 3B subunit 2. (556 aa)
Prpf3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
Phf5aPHD finger-like domain-containing protein 5A. (110 aa)
Esrp1Epithelial splicing regulatory protein 1 isoform X1. (667 aa)
U2af1l4Splicing factor U2AF 26 kDa subunit. (220 aa)
Srsf7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
Gemin2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (269 aa)
ENSMAUP00000019072annotation not available (157 aa)
HnrnpmHeterogeneous nuclear ribonucleoprotein M isoform X1. (730 aa)
Srrm3Serine/arginine repetitive matrix protein 3. (647 aa)
Txnl4a-2Thioredoxin-like protein 4A isoform X3. (63 aa)
ENSMAUP00000019450annotation not available (83 aa)
Cdk13Cyclin-dependent kinase 13. (1478 aa)
Srsf12Serine/arginine-rich splicing factor 12. (253 aa)
Prpf4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
LOC101834723pre-mRNA-splicing factor 38A. (263 aa)
ENSMAUP00000019942annotation not available (190 aa)
Luc7lPutative RNA-binding protein Luc7-like 1. (69 aa)
Wbp4WW domain-binding protein 4. (376 aa)
Dnajc8dnaJ homolog subfamily C member 8. (223 aa)
Gpatch11G patch domain-containing protein 11. (262 aa)
Puf60-2poly(U)-binding-splicing factor PUF60 isoform X4. (470 aa)
Glod4Gem-associated protein 4. (1058 aa)
Kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (870 aa)
Snrpd2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
Gemin7Gem-associated protein 7. (131 aa)
Lsm4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
Syf2pre-mRNA-splicing factor SYF2 isoform X1. (242 aa)
Ptbp2Polypyrimidine tract-binding protein 2 isoform X3. (532 aa)
Cdc40pre-mRNA-processing factor 17. (579 aa)
ENSMAUP00000021312annotation not available (135 aa)
Hnrnpa1Heterogeneous nuclear ribonucleoprotein A1 isoform X2. (320 aa)
Rbmx2RNA-binding motif protein, X-linked 2. (333 aa)
Lrrc51Leucine-rich repeat-containing protein 51. (192 aa)
Rbm17Splicing factor 45. (405 aa)
Rbm19Probable RNA-binding protein 19. (951 aa)
ENSMAUP00000021666annotation not available (60 aa)
Srsf10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
Clns1aMethylosome subunit pICln. (241 aa)
Khdc4UPF0469 protein KIAA0907 homolog. (611 aa)
Yju2Coiled-coil domain-containing protein 94. (326 aa)
SnrpfSmall nuclear ribonucleoprotein polypeptide F. (74 aa)
Dhx8ATP-dependent RNA helicase DHX8. (309 aa)
LOC110340397Probable ATP-dependent RNA helicase DDX17 isoform X1. (183 aa)
Prpf40apre-mRNA-processing factor 40 homolog A isoform X2. (953 aa)
ENSMAUP00000023020annotation not available (90 aa)
Dnajc17dnaJ homolog subfamily C member 17 isoform X1. (303 aa)
Ccdc130Coiled-coil domain-containing protein 130. (353 aa)
PpiePeptidyl-prolyl cis-trans isomerase E. (169 aa)
Sf3a1Splicing factor 3A subunit 1 isoform X2. (758 aa)
Celf5CUGBP Elav-like family member 5 isoform X1. (395 aa)
Dhx9ATP-dependent RNA helicase A. (1386 aa)
Ddx17Probable ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (395 aa)
U2af1Splicing factor U2AF 35 kDa subunit isoform X1. (239 aa)
SnrpgSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
Rbm5RNA-binding protein 5 isoform X1. (828 aa)
Ncbp1Nuclear cap-binding protein subunit 1. (789 aa)
ENSMAUP00000023527annotation not available (78 aa)
ENSMAUP00000023663annotation not available (178 aa)
Crnkl1Crooked neck-like protein 1. (690 aa)
ENSMAUP00000023791annotation not available (214 aa)
ENSMAUP00000023853annotation not available (267 aa)
Snrnp70U1 small nuclear ribonucleoprotein 70 kDa. (444 aa)
Scnm1Sodium channel modifier 1. (164 aa)
AqrRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1298 aa)
Eftud2116 kDa U5 small nuclear ribonucleoprotein component isoform X1. (972 aa)
Snrpd3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
Ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
CUNH9orf78Uncharacterized protein C9orf78 homolog. (289 aa)
Srsf1Serine/arginine-rich splicing factor 1. (253 aa)
Txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
Gcfc2GC-rich sequence DNA-binding factor 2 isoform X1. (772 aa)
ENSMAUP00000025369annotation not available (201 aa)
Srsf4Serine/arginine-rich splicing factor 4. (490 aa)
Lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
Rbm44RNA-binding protein 44. (931 aa)
Mfap1Microfibrillar-associated protein 1. (439 aa)
Usp4Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (963 aa)
Srsf2Serine/arginine-rich splicing factor 2. (221 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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