STRINGSTRING
ENSMAUP00000006800 ENSMAUP00000006800 Rbm11 Rbm11 Khdrbs3 Khdrbs3 Zc3h10 Zc3h10 Ptbp1 Ptbp1 U2af2 U2af2 Celf3 Celf3 Prdx6 Prdx6 Dazap1 Dazap1 Rbm10 Rbm10 Srsf3 Srsf3 Srsf2 Srsf2 Srsf4 Srsf4 ENSMAUP00000025369 ENSMAUP00000025369 Rbmxl2 Rbmxl2 Rbm38 Rbm38 Pcbp4 Pcbp4 C1qbp C1qbp Snrnp70 Snrnp70 Tia1 Tia1 Ncbp1 Ncbp1 Rbm5 Rbm5 Rbfox1 Rbfox1 Wtap Wtap Ddx17 Ddx17 Celf5 Celf5 ENSMAUP00000022912 ENSMAUP00000022912 LOC110340397 LOC110340397 Thrap3 Thrap3 Rbmx Rbmx Srsf10 Srsf10 Hnrnpa1 Hnrnpa1 ENSMAUP00000021312 ENSMAUP00000021312 Zbtb7a Zbtb7a Rbfox2 Rbfox2 Puf60-2 Puf60-2 Dyrk1a Dyrk1a Raver1 Raver1 Rbm7 Rbm7 Obi1 Obi1 LOC101839191 LOC101839191 Srsf12 Srsf12 Rbm25-2 Rbm25-2 Nsrp1 Nsrp1 Srsf7 Srsf7 Snw1 Snw1 Sfswap Sfswap Rbm8a Rbm8a Celf4 Celf4 LOC101831331 LOC101831331 ENSMAUP00000000116 ENSMAUP00000000116 LOC101824858 LOC101824858 Acin1 Acin1 Ptbp3 Ptbp3 ENSMAUP00000000889 ENSMAUP00000000889 LOC101832437 LOC101832437 Nova1 Nova1 Mbnl3 Mbnl3 ENSMAUP00000001644 ENSMAUP00000001644 Fxr1 Fxr1 Ythdc1 Ythdc1 ENSMAUP00000002107 ENSMAUP00000002107 Lmntd2 Lmntd2 Rbm7-2 Rbm7-2 Qk Qk Fxr2 Fxr2 Son Son Cirbp Cirbp Tra2b Tra2b ENSMAUP00000003314 ENSMAUP00000003314 Mbnl1 Mbnl1 Raver2 Raver2 ENSMAUP00000004100 ENSMAUP00000004100 Sap18 Sap18 Ncl Ncl Larp7 Larp7 Hnrnpa2b1 Hnrnpa2b1 Fmr1 Fmr1 Hmx2 Hmx2 Rbm15 Rbm15 Nup98 Nup98 Rbm3 Rbm3 LOC101824511 LOC101824511 Magoh Magoh Srrm1 Srrm1 Rbm25 Rbm25 Zfp64 Zfp64 Hnrnpk Hnrnpk Sf3b4 Sf3b4 Fam172a Fam172a ENSMAUP00000015601 ENSMAUP00000015601 Mettl16 Mettl16 Khdrbs1 Khdrbs1 Rbm39 Rbm39 ENSMAUP00000014656 ENSMAUP00000014656 Puf60 Puf60 Cep57l1 Cep57l1 Sf1 Sf1 Nova2 Nova2 Myod1 Myod1 Mbnl2 Mbnl2 ENSMAUP00000013857 ENSMAUP00000013857 Smu1 Smu1 ENSMAUP00000013721 ENSMAUP00000013721 Khdrbs2 Khdrbs2 Rbfox3 Rbfox3 Srrm4 Srrm4 Eif4a3 Eif4a3 ENSMAUP00000012407 ENSMAUP00000012407 ENSMAUP00000012377 ENSMAUP00000012377 Celf6 Celf6 Prpf19 Prpf19 Rbm20 Rbm20 Prr3 Prr3 ENSMAUP00000010589 ENSMAUP00000010589 Srsf9 Srsf9 Rbm42 Rbm42 Jmjd6 Jmjd6 Rbm24 Rbm24 ENSMAUP00000010327 ENSMAUP00000010327 ENSMAUP00000008380 ENSMAUP00000008380 Celf2 Celf2 Slc39a5 Slc39a5 Celf1 Celf1 Hnrnpu Hnrnpu Ddx5 Ddx5 Hnrnpl Hnrnpl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSMAUP00000006800annotation not available (133 aa)
Rbm11Splicing regulator RBM11. (238 aa)
Khdrbs3KH domain-containing, RNA-binding, signal transduction-associated protein 3 isoform X1. (321 aa)
Zc3h10Zinc finger CCCH domain-containing protein 10. (435 aa)
Ptbp1Polypyrimidine tract-binding protein 1. (545 aa)
U2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (468 aa)
Celf3CUGBP Elav-like family member 3 isoform X1. (462 aa)
Prdx6Peroxiredoxin-6; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Can reduce H(2)O(2) and short chain organic, fatty acid, and phospholipid hydroperoxides. Also has phospholipase activity, and can therefore either reduce the oxidized sn-2 fatty acyl grup of phospholipids (peroxidase activity) or hydrolyze the sn-2 ester bond of phospholipids (phospholipase activity). These activities are dependent on binding to phospholipids at acidic pH and to oxidized phospholipds at cytosolic pH. Plays a role [...] (224 aa)
Dazap1DAZ-associated protein 1 isoform X2. (406 aa)
Rbm10RNA-binding protein 10 isoform X5. (931 aa)
Srsf3Serine/arginine-rich splicing factor 3. (164 aa)
Srsf2Serine/arginine-rich splicing factor 2. (221 aa)
Srsf4Serine/arginine-rich splicing factor 4. (490 aa)
ENSMAUP00000025369annotation not available (201 aa)
Rbmxl2RNA-binding motif protein, X-linked-like-2. (313 aa)
Rbm38RNA-binding protein 38. (237 aa)
Pcbp4poly(RC)-binding protein 4 isoform X1. (404 aa)
C1qbpComplement component 1 Q subcomponent-binding protein, mitochondrial. (281 aa)
Snrnp70U1 small nuclear ribonucleoprotein 70 kDa. (444 aa)
Tia1Nucleolysin TIA-1 isoform X2. (387 aa)
Ncbp1Nuclear cap-binding protein subunit 1. (789 aa)
Rbm5RNA-binding protein 5 isoform X1. (828 aa)
Rbfox1RNA binding protein fox-1 homolog 1. (295 aa)
Wtappre-mRNA-splicing regulator WTAP. (387 aa)
Ddx17Probable ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (395 aa)
Celf5CUGBP Elav-like family member 5 isoform X1. (395 aa)
ENSMAUP00000022912annotation not available (508 aa)
LOC110340397Probable ATP-dependent RNA helicase DDX17 isoform X1. (183 aa)
Thrap3Thyroid hormone receptor-associated protein 3. (952 aa)
RbmxRNA-binding motif protein, X chromosome isoform X1. (391 aa)
Srsf10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
Hnrnpa1Heterogeneous nuclear ribonucleoprotein A1 isoform X2. (320 aa)
ENSMAUP00000021312annotation not available (135 aa)
Zbtb7aZinc finger and BTB domain-containing protein 7A isoform X1. (413 aa)
Rbfox2RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (378 aa)
Puf60-2poly(U)-binding-splicing factor PUF60 isoform X4. (470 aa)
Dyrk1aDual specificity tyrosine-phosphorylation-regulated kinase 1A isoform X1. (763 aa)
Raver1Ribonucleoprotein PTB-binding 1. (744 aa)
Rbm7RNA binding motif protein 7. (155 aa)
Obi1RING finger protein 219. (717 aa)
LOC101839191RE1-silencing transcription factor-like. (301 aa)
Srsf12Serine/arginine-rich splicing factor 12. (253 aa)
Rbm25-2RNA-binding protein 25. (372 aa)
Nsrp1Nuclear speckle splicing regulatory protein 1 isoform X1. (78 aa)
Srsf7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
Snw1SNW domain-containing protein 1. (536 aa)
SfswapSplicing factor, suppressor of white-apricot homolog. (476 aa)
Rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
Celf4CUGBP Elav-like family member 4. (114 aa)
LOC101831331RNA binding motif protein, X-linked-like-1. (388 aa)
ENSMAUP00000000116annotation not available (145 aa)
LOC101824858Synaptic functional regulator FMR1. (280 aa)
Acin1Apoptotic chromatin condensation inducer 1. (831 aa)
Ptbp3Polypyrimidine tract-binding protein 3. (524 aa)
ENSMAUP00000000889annotation not available (148 aa)
LOC101832437RNA-binding protein with serine-rich domain 1. (148 aa)
Nova1RNA-binding protein Nova-1. (121 aa)
Mbnl3Muscleblind-like protein 3 isoform X4. (342 aa)
ENSMAUP00000001644annotation not available (227 aa)
Fxr1Fragile X mental retardation syndrome-related protein 1 isoform X1. (677 aa)
Ythdc1YTH domain-containing protein 1 isoform X1. (733 aa)
ENSMAUP00000002107annotation not available (148 aa)
Lmntd2Lamin tail domain-containing protein 2. (661 aa)
Rbm7-2RNA-binding protein 7. (265 aa)
QkProtein quaking. (303 aa)
Fxr2Fragile X mental retardation syndrome-related protein 2. (673 aa)
SonProtein SON. (454 aa)
CirbpCold-inducible RNA-binding protein isoform X2. (172 aa)
Tra2bTransformer-2 protein homolog beta. (182 aa)
ENSMAUP00000003314annotation not available (266 aa)
Mbnl1Muscleblind-like protein 1 isoform X2. (387 aa)
Raver2Ribonucleoprotein PTB-binding 2. (673 aa)
ENSMAUP00000004100annotation not available (198 aa)
Sap18Histone deacetylase complex subunit SAP18. (129 aa)
NclNucleolin. (76 aa)
Larp7La-related protein 7. (497 aa)
Hnrnpa2b1Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1. (353 aa)
Fmr1Synaptic functional regulator FMR1. (355 aa)
Hmx2Homeobox protein HMX2. (273 aa)
Rbm15Putative RNA-binding protein 15. (961 aa)
Nup98Nuclear pore complex protein Nup98-Nup96 isoform X5. (1742 aa)
Rbm3RNA-binding protein 3 isoform X1. (156 aa)
LOC101824511Splicing factor, suppressor of white-apricot homolog. (127 aa)
MagohProtein mago nashi homolog. (146 aa)
Srrm1Serine/arginine repetitive matrix protein 1 isoform X1. (932 aa)
Rbm25RNA binding motif protein 25. (84 aa)
Zfp64Zinc finger protein 64 isoform X1. (679 aa)
HnrnpkHeterogeneous nuclear ribonucleoprotein K. (484 aa)
Sf3b4Splicing factor 3B subunit 4. (424 aa)
Fam172aProtein FAM172A-like. (343 aa)
ENSMAUP00000015601annotation not available (310 aa)
Mettl16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (519 aa)
Khdrbs1KH domain-containing, RNA-binding, signal transduction-associated protein 1. (408 aa)
Rbm39RNA-binding protein 39. (505 aa)
ENSMAUP00000014656annotation not available (79 aa)
Puf60poly(U)-binding-splicing factor PUF60 isoform X1. (408 aa)
Cep57l1Centrosomal protein CEP57L1 isoform X1. (436 aa)
Sf1Splicing factor 1 isoform X9. (638 aa)
Nova2LOW QUALITY PROTEIN: RNA-binding protein Nova-2. (501 aa)
Myod1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (318 aa)
Mbnl2Muscleblind-like protein 2 isoform X3. (317 aa)
ENSMAUP00000013857annotation not available (192 aa)
Smu1WD40 repeat-containing protein SMU1. (513 aa)
ENSMAUP00000013721annotation not available (98 aa)
Khdrbs2KH domain-containing, RNA-binding, signal transduction-associated protein 2. (274 aa)
Rbfox3RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (375 aa)
Srrm4Serine/arginine repetitive matrix protein 4. (599 aa)
Eif4a3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
ENSMAUP00000012407annotation not available (102 aa)
ENSMAUP00000012377annotation not available (137 aa)
Celf6CUGBP Elav-like family member 6 isoform X1. (481 aa)
Prpf19pre-mRNA-processing factor 19 isoform X1. (523 aa)
Rbm20RNA-binding protein 20. (1144 aa)
Prr3Proline-rich protein 3 isoform X1. (194 aa)
ENSMAUP00000010589annotation not available (151 aa)
Srsf9Serine/arginine-rich splicing factor 9. (221 aa)
Rbm42RNA binding motif protein 42. (174 aa)
Jmjd6Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 isoform X1. (403 aa)
Rbm24RNA-binding protein 24 isoform X1. (236 aa)
ENSMAUP00000010327annotation not available (476 aa)
ENSMAUP00000008380annotation not available (68 aa)
Celf2CUGBP Elav-like family member 2 isoform X2. (451 aa)
Slc39a5Zinc transporter ZIP5 isoform X1. (538 aa)
Celf1CUGBP Elav-like family member 1 isoform X6. (513 aa)
HnrnpuHeterogeneous nuclear ribonucleoprotein U. (813 aa)
Ddx5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (615 aa)
HnrnplHeterogeneous nuclear ribonucleoprotein L isoform X2. (586 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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