Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bmpr2 | LOC101837667 | ENSMAUP00000007461 | ENSMAUP00000020448 | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | Activin receptor type-1. | 0.976 |
| Bmpr2 | Tgfb2 | ENSMAUP00000007461 | ENSMAUP00000008752 | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.754 |
| Gata4 | Hey2 | ENSMAUP00000014344 | ENSMAUP00000010202 | Transcription factor GATA-4 isoform X2. | Hairy/enhancer-of-split related with YRPW motif protein 2. | 0.457 |
| Gata4 | Isl1 | ENSMAUP00000014344 | ENSMAUP00000008360 | Transcription factor GATA-4 isoform X2. | Insulin gene enhancer protein ISL-1; DNA-binding transcriptional activator. Recognizes and binds to the consensus octamer binding site 5'-ATAATTAA-3' in promoter of target genes. Plays a fundamental role in the gene regulatory network essential for retinal ganglion cell (RGC) differentiation. Cooperates with the transcription factor POU4F2 to achieve maximal levels of expression of RGC target genes and RGC fate specification in the developing retina. Involved in the specification of motor neurons in cooperation with LHX3 and LDB1. Binds to insulin gene enhancer sequences. Essential for [...] | 0.661 |
| Gata4 | Nkx2-5 | ENSMAUP00000014344 | ENSMAUP00000005606 | Transcription factor GATA-4 isoform X2. | Homeobox protein Nkx-2.5. | 0.973 |
| Gata4 | Tbx20 | ENSMAUP00000014344 | ENSMAUP00000005438 | Transcription factor GATA-4 isoform X2. | T-box transcription factor TBX20. | 0.794 |
| Gata4 | Tbx5 | ENSMAUP00000014344 | ENSMAUP00000003096 | Transcription factor GATA-4 isoform X2. | T-box transcription factor TBX5. | 0.802 |
| Gata4 | Zfpm1 | ENSMAUP00000014344 | ENSMAUP00000019701 | Transcription factor GATA-4 isoform X2. | Zinc finger protein ZFPM1 isoform X1. | 0.838 |
| Gja5 | Nkx2-5 | ENSMAUP00000017843 | ENSMAUP00000005606 | Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. | Homeobox protein Nkx-2.5. | 0.566 |
| Hey2 | Gata4 | ENSMAUP00000010202 | ENSMAUP00000014344 | Hairy/enhancer-of-split related with YRPW motif protein 2. | Transcription factor GATA-4 isoform X2. | 0.457 |
| Hey2 | Notch2 | ENSMAUP00000010202 | ENSMAUP00000017816 | Hairy/enhancer-of-split related with YRPW motif protein 2. | Neurogenic locus notch homolog protein 2. | 0.560 |
| Hey2 | Tbx20 | ENSMAUP00000010202 | ENSMAUP00000005438 | Hairy/enhancer-of-split related with YRPW motif protein 2. | T-box transcription factor TBX20. | 0.424 |
| Isl1 | Gata4 | ENSMAUP00000008360 | ENSMAUP00000014344 | Insulin gene enhancer protein ISL-1; DNA-binding transcriptional activator. Recognizes and binds to the consensus octamer binding site 5'-ATAATTAA-3' in promoter of target genes. Plays a fundamental role in the gene regulatory network essential for retinal ganglion cell (RGC) differentiation. Cooperates with the transcription factor POU4F2 to achieve maximal levels of expression of RGC target genes and RGC fate specification in the developing retina. Involved in the specification of motor neurons in cooperation with LHX3 and LDB1. Binds to insulin gene enhancer sequences. Essential for [...] | Transcription factor GATA-4 isoform X2. | 0.661 |
| Isl1 | Nkx2-5 | ENSMAUP00000008360 | ENSMAUP00000005606 | Insulin gene enhancer protein ISL-1; DNA-binding transcriptional activator. Recognizes and binds to the consensus octamer binding site 5'-ATAATTAA-3' in promoter of target genes. Plays a fundamental role in the gene regulatory network essential for retinal ganglion cell (RGC) differentiation. Cooperates with the transcription factor POU4F2 to achieve maximal levels of expression of RGC target genes and RGC fate specification in the developing retina. Involved in the specification of motor neurons in cooperation with LHX3 and LDB1. Binds to insulin gene enhancer sequences. Essential for [...] | Homeobox protein Nkx-2.5. | 0.586 |
| Isl1 | Tbx20 | ENSMAUP00000008360 | ENSMAUP00000005438 | Insulin gene enhancer protein ISL-1; DNA-binding transcriptional activator. Recognizes and binds to the consensus octamer binding site 5'-ATAATTAA-3' in promoter of target genes. Plays a fundamental role in the gene regulatory network essential for retinal ganglion cell (RGC) differentiation. Cooperates with the transcription factor POU4F2 to achieve maximal levels of expression of RGC target genes and RGC fate specification in the developing retina. Involved in the specification of motor neurons in cooperation with LHX3 and LDB1. Binds to insulin gene enhancer sequences. Essential for [...] | T-box transcription factor TBX20. | 0.517 |
| Isl1 | Tbx5 | ENSMAUP00000008360 | ENSMAUP00000003096 | Insulin gene enhancer protein ISL-1; DNA-binding transcriptional activator. Recognizes and binds to the consensus octamer binding site 5'-ATAATTAA-3' in promoter of target genes. Plays a fundamental role in the gene regulatory network essential for retinal ganglion cell (RGC) differentiation. Cooperates with the transcription factor POU4F2 to achieve maximal levels of expression of RGC target genes and RGC fate specification in the developing retina. Involved in the specification of motor neurons in cooperation with LHX3 and LDB1. Binds to insulin gene enhancer sequences. Essential for [...] | T-box transcription factor TBX5. | 0.565 |
| LOC101837667 | Bmpr2 | ENSMAUP00000020448 | ENSMAUP00000007461 | Activin receptor type-1. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.976 |
| LOC101837667 | Tgfb2 | ENSMAUP00000020448 | ENSMAUP00000008752 | Activin receptor type-1. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.797 |
| Nkx2-5 | Gata4 | ENSMAUP00000005606 | ENSMAUP00000014344 | Homeobox protein Nkx-2.5. | Transcription factor GATA-4 isoform X2. | 0.973 |
| Nkx2-5 | Gja5 | ENSMAUP00000005606 | ENSMAUP00000017843 | Homeobox protein Nkx-2.5. | Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. | 0.566 |
page 1 of 2