STRINGSTRING
Usp7 Usp7 Pbx4 Pbx4 Smarcc1 Smarcc1 Ube2a Ube2a H2ax H2ax Ube2b Ube2b Atr Atr Dmrtc2 Dmrtc2 Birc2 Birc2 Zcwpw1 Zcwpw1 Esco2 Esco2 Rad18 Rad18 Smarcb1 Smarcb1 Mael Mael
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Usp7Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (496 aa)
Pbx4pre-B-cell leukemia transcription factor 4 isoform X5. (380 aa)
Smarcc1SWI/SNF complex subunit SMARCC1 isoform X1. (1013 aa)
Ube2aUbiquitin-conjugating enzyme E2 A isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
H2axHistone H2A; Belongs to the histone H2A family. (143 aa)
Ube2bUbiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
AtrSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2148 aa)
Dmrtc2Doublesex- and mab-3-related transcription factor C2. (370 aa)
Birc2Baculoviral IAP repeat-containing protein 2. (592 aa)
Zcwpw1Zinc finger CW-type PWWP domain protein 1. (442 aa)
Esco2LOW QUALITY PROTEIN: N-acetyltransferase ESCO2. (597 aa)
Rad18E3 ubiquitin-protein ligase RAD18 isoform X2. (453 aa)
Smarcb1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (385 aa)
MaelProtein maelstrom homolog. (434 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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