Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Acd | Dkc1 | ENSMAUP00000008001 | ENSMAUP00000017643 | Adrenocortical dysplasia protein homolog isoform X2. | H/ACA ribonucleoprotein complex subunit 4. | 0.658 |
| Acd | Gar1 | ENSMAUP00000008001 | ENSMAUP00000018109 | Adrenocortical dysplasia protein homolog isoform X2. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.763 |
| Acd | Wrap53 | ENSMAUP00000008001 | ENSMAUP00000007221 | Adrenocortical dysplasia protein homolog isoform X2. | Telomerase Cajal body protein 1; RNA chaperone that plays a key role in telomere maintenance and RNA localization to Cajal bodies. Specifically recognizes and binds the Cajal body box (CAB box) present in both small Cajal body RNAs (scaRNAs) and telomerase RNA template component (TERC). Essential component of the telomerase holoenzyme complex, a ribonucleoprotein complex essential for the replication of chromosome termini that elongates telomeres in most eukaryotes. In the telomerase holoenzyme complex, required to stimulate the catalytic activity of the complex. Acts by specifically b [...] | 0.760 |
| Dkc1 | Acd | ENSMAUP00000017643 | ENSMAUP00000008001 | H/ACA ribonucleoprotein complex subunit 4. | Adrenocortical dysplasia protein homolog isoform X2. | 0.658 |
| Dkc1 | ENSMAUP00000008641 | ENSMAUP00000017643 | ENSMAUP00000008641 | H/ACA ribonucleoprotein complex subunit 4. | annotation not available | 0.935 |
| Dkc1 | Gar1 | ENSMAUP00000017643 | ENSMAUP00000018109 | H/ACA ribonucleoprotein complex subunit 4. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.999 |
| Dkc1 | Gnl3l | ENSMAUP00000017643 | ENSMAUP00000014087 | H/ACA ribonucleoprotein complex subunit 4. | Guanine nucleotide-binding protein-like 3-like protein. | 0.934 |
| Dkc1 | Nat10 | ENSMAUP00000017643 | ENSMAUP00000009549 | H/ACA ribonucleoprotein complex subunit 4. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.935 |
| Dkc1 | Wrap53 | ENSMAUP00000017643 | ENSMAUP00000007221 | H/ACA ribonucleoprotein complex subunit 4. | Telomerase Cajal body protein 1; RNA chaperone that plays a key role in telomere maintenance and RNA localization to Cajal bodies. Specifically recognizes and binds the Cajal body box (CAB box) present in both small Cajal body RNAs (scaRNAs) and telomerase RNA template component (TERC). Essential component of the telomerase holoenzyme complex, a ribonucleoprotein complex essential for the replication of chromosome termini that elongates telomeres in most eukaryotes. In the telomerase holoenzyme complex, required to stimulate the catalytic activity of the complex. Acts by specifically b [...] | 0.996 |
| ENSMAUP00000008641 | Dkc1 | ENSMAUP00000008641 | ENSMAUP00000017643 | annotation not available | H/ACA ribonucleoprotein complex subunit 4. | 0.935 |
| ENSMAUP00000008641 | Gar1 | ENSMAUP00000008641 | ENSMAUP00000018109 | annotation not available | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.757 |
| ENSMAUP00000008641 | Gnl3l | ENSMAUP00000008641 | ENSMAUP00000014087 | annotation not available | Guanine nucleotide-binding protein-like 3-like protein. | 0.824 |
| ENSMAUP00000008641 | Nat10 | ENSMAUP00000008641 | ENSMAUP00000009549 | annotation not available | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.938 |
| ENSMAUP00000008641 | Nvl | ENSMAUP00000008641 | ENSMAUP00000015844 | annotation not available | Nuclear valosin-containing protein-like isoform X1. | 0.536 |
| ENSMAUP00000019450 | Gar1 | ENSMAUP00000019450 | ENSMAUP00000018109 | annotation not available | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.430 |
| ENSMAUP00000019450 | Snrpd3 | ENSMAUP00000019450 | ENSMAUP00000024574 | annotation not available | Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. | 0.799 |
| ENSMAUP00000023853 | Gar1 | ENSMAUP00000023853 | ENSMAUP00000018109 | annotation not available | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.430 |
| ENSMAUP00000023853 | Hnrnpc | ENSMAUP00000023853 | ENSMAUP00000000960 | annotation not available | Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. | 0.685 |
| ENSMAUP00000023853 | Snrpd3 | ENSMAUP00000023853 | ENSMAUP00000024574 | annotation not available | Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. | 0.799 |
| Gar1 | Acd | ENSMAUP00000018109 | ENSMAUP00000008001 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Adrenocortical dysplasia protein homolog isoform X2. | 0.763 |
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