42 items (Mesocricetus auratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Fundc2	FUN14 domain-containing protein 2 isoform X2. (151 aa)
	Mterf3	Transcription termination factor 3, mitochondrial. (414 aa)
	Sqstm1	Sequestosome-1 isoform X1. (442 aa)
	Atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	Tomm40l	Mitochondrial import receptor subunit TOM40B. (308 aa)
	Pink1	Serine/threonine-protein kinase PINK1, mitochondrial. (579 aa)
	Map1lc3b	Microtubule-associated proteins 1A/1B light chain 3B. (125 aa)
	Atg12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (141 aa)
	ENSMAUP00000019431	annotation not available (150 aa)
	Fndc3b	Fibronectin type III domain-containing protein 3B isoform X1. (1206 aa)
	Tomm6	Mitochondrial import receptor subunit TOM6 homolog. (73 aa)
	Tomm20	Translocase of outer mitochondrial membrane 20. (141 aa)
	ENSMAUP00000025569	annotation not available (124 aa)
	Csnk2a1	LOW QUALITY PROTEIN: casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (380 aa)
	ENSMAUP00000000599	annotation not available (126 aa)
	LOC101841110	LOW QUALITY PROTEIN: voltage-dependent anion-selective channel protein 1-like. (321 aa)
	ENSMAUP00000022314	annotation not available (101 aa)
	Tomm70a	Mitochondrial import receptor subunit TOM70. (586 aa)
	Tomm22	Mitochondrial import receptor subunit TOM22 homolog. (142 aa)
	Csnk2b	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	Kxd1	ubiquitin-60S ribosomal protein L40. (232 aa)
	Fundc1	FUN14 domain-containing protein 1. (155 aa)
	Prkn	RBR-type E3 ubiquitin transferase. (123 aa)
	Ulk1	Serine/threonine-protein kinase; Serine/threonine-protein kinase involved in autophagy in response to starvation; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. APG1/unc-51/ULK1 subfamily. (1040 aa)
	Ulk2	Serine/threonine-protein kinase ULK2. (1023 aa)
	Tomm20l	TOMM20-like protein 1. (107 aa)
	Tomm5	Mitochondrial import receptor subunit TOM5 homolog. (51 aa)
	Rps27a	ubiquitin-40S ribosomal protein S27a. (156 aa)
	LOC101832546	Mitochondrial import receptor subunit TOM20 homolog. (145 aa)
	Csnk2a2	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (325 aa)
	LOC101823019	Ubiquitin-like. (114 aa)
	Mfn2	Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
	Pgam5	Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1. (289 aa)
	Tomm40	Mitochondrial import receptor subunit TOM40 homolog. (361 aa)
	ENSMAUP00000007258	annotation not available (117 aa)
	LOC101827110	Fibronectin type III domain containing protein 3C1-like. (1355 aa)
	Src	Tyrosine-protein kinase. (536 aa)
	Tomm7	Mitochondrial import receptor subunit TOM7 homolog. (55 aa)
	Mfn1	Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (741 aa)
	Fndc3a	Fibronectin type-III domain-containing protein 3A. (1171 aa)
	Map1lc3a	Microtubule-associated proteins 1A/1B light chain 3A. (121 aa)
	ENSMAUP00000012207	annotation not available (134 aa)

Your Current Organism:

Mesocricetus auratus

NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atg12	Atg5	ENSMAUP00000019282	ENSMAUP00000017377	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.999
Atg12	Fundc1	ENSMAUP00000019282	ENSMAUP00000002634	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	FUN14 domain-containing protein 1.	0.698
Atg12	Fundc2	ENSMAUP00000019282	ENSMAUP00000013831	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	FUN14 domain-containing protein 2 isoform X2.	0.698
Atg12	LOC101841110	ENSMAUP00000019282	ENSMAUP00000001436	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	LOW QUALITY PROTEIN: voltage-dependent anion-selective channel protein 1-like.	0.700
Atg12	Map1lc3a	ENSMAUP00000019282	ENSMAUP00000010994	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule-associated proteins 1A/1B light chain 3A.	0.921
Atg12	Map1lc3b	ENSMAUP00000019282	ENSMAUP00000019113	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule-associated proteins 1A/1B light chain 3B.	0.924
Atg12	Mfn1	ENSMAUP00000019282	ENSMAUP00000009688	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.751
Atg12	Mfn2	ENSMAUP00000019282	ENSMAUP00000006843	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.751
Atg12	Pink1	ENSMAUP00000019282	ENSMAUP00000018800	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Serine/threonine-protein kinase PINK1, mitochondrial.	0.639
Atg12	Prkn	ENSMAUP00000019282	ENSMAUP00000002563	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	RBR-type E3 ubiquitin transferase.	0.556
Atg12	Sqstm1	ENSMAUP00000019282	ENSMAUP00000014683	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Sequestosome-1 isoform X1.	0.886
Atg12	Ulk1	ENSMAUP00000019282	ENSMAUP00000003764	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Serine/threonine-protein kinase; Serine/threonine-protein kinase involved in autophagy in response to starvation; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. APG1/unc-51/ULK1 subfamily.	0.972
Atg12	Ulk2	ENSMAUP00000019282	ENSMAUP00000021393	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Serine/threonine-protein kinase ULK2.	0.967
Atg5	Atg12	ENSMAUP00000017377	ENSMAUP00000019282	Autophagy protein 5; Involved in autophagic vesicle formation.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.999
Atg5	Fundc1	ENSMAUP00000017377	ENSMAUP00000002634	Autophagy protein 5; Involved in autophagic vesicle formation.	FUN14 domain-containing protein 1.	0.697
Atg5	Fundc2	ENSMAUP00000017377	ENSMAUP00000013831	Autophagy protein 5; Involved in autophagic vesicle formation.	FUN14 domain-containing protein 2 isoform X2.	0.694
Atg5	LOC101841110	ENSMAUP00000017377	ENSMAUP00000001436	Autophagy protein 5; Involved in autophagic vesicle formation.	LOW QUALITY PROTEIN: voltage-dependent anion-selective channel protein 1-like.	0.726
Atg5	Map1lc3a	ENSMAUP00000017377	ENSMAUP00000010994	Autophagy protein 5; Involved in autophagic vesicle formation.	Microtubule-associated proteins 1A/1B light chain 3A.	0.911
Atg5	Map1lc3b	ENSMAUP00000017377	ENSMAUP00000019113	Autophagy protein 5; Involved in autophagic vesicle formation.	Microtubule-associated proteins 1A/1B light chain 3B.	0.916
Atg5	Mfn1	ENSMAUP00000017377	ENSMAUP00000009688	Autophagy protein 5; Involved in autophagic vesicle formation.	Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.773

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