STRINGSTRING
Cops2 Cops2 LOC106023063 LOC106023063 Ercc2 Ercc2 Polr2c Polr2c Polr2i Polr2i ENSMAUP00000002256 ENSMAUP00000002256 Cul4b Cul4b Kxd1 Kxd1 Ppp1r42 Ppp1r42 ENSMAUP00000003260 ENSMAUP00000003260 Ep300 Ep300 Ercc3 Ercc3 Cops7b-2 Cops7b-2 Rps27a Rps27a Upk3bl Upk3bl Usp7 Usp7 Ercc6 Ercc6 LOC101823019 LOC101823019 Cops7b Cops7b Isy1 Isy1 ENSMAUP00000007258 ENSMAUP00000007258 Gtf2h1 Gtf2h1 Tceanc Tceanc Hmgn1 Hmgn1 ENSMAUP00000008237 ENSMAUP00000008237 Polr2e Polr2e Polr2k Polr2k LOC101840076 LOC101840076 Gtf2h2 Gtf2h2 Rbx1 Rbx1 ENSMAUP00000009986 ENSMAUP00000009986 Zfp830 Zfp830 Tcea2 Tcea2 Prpf19 Prpf19 Ddb1 Ddb1 Gtf2h3 Gtf2h3 Polr2j Polr2j Polr2g Polr2g Xpa Xpa Cops5 Cops5 Cdk7 Cdk7 Polr2d Polr2d Cops7a Cops7a Cops6 Cops6 Ercc8 Ercc8 Gps1 Gps1 ENSMAUP00000016955 ENSMAUP00000016955 Polr2h Polr2h Xab2 Xab2 Cops8 Cops8 Tcea1 Tcea1 Hmgn2 Hmgn2 Cops3 Cops3 Ccnh Ccnh Polr2b Polr2b ENSMAUP00000019431 ENSMAUP00000019431 Uvssa Uvssa Polr2f Polr2f Nrde2 Nrde2 Tcea3 Tcea3 Mnat1 Mnat1 Polr2l Polr2l ENSMAUP00000021238 ENSMAUP00000021238 ENSMAUP00000022314 ENSMAUP00000022314 Ppie Ppie Tceanc2 Tceanc2 Polr2a Polr2a Aqr Aqr Gtf2h4 Gtf2h4 Gtf2h5 Gtf2h5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cops2COP9 signalosome complex subunit 2 isoform X1. (450 aa)
LOC106023063General transcription factor IIH subunit 1-like. (86 aa)
Ercc2TFIIH basal transcription factor complex helicase XPD subunit. (741 aa)
Polr2cDNA-directed RNA polymerase II subunit RPB3. (250 aa)
Polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
ENSMAUP00000002256annotation not available (75 aa)
Cul4bcullin-4B; Belongs to the cullin family. (555 aa)
Kxd1ubiquitin-60S ribosomal protein L40. (232 aa)
Ppp1r42Protein phosphatase 1 regulatory subunit 42 isoform X1. (357 aa)
ENSMAUP00000003260annotation not available (95 aa)
Ep300Histone acetyltransferase p300 isoform X3. (2417 aa)
Ercc3TFIIH basal transcription factor complex helicase XPB subunit. (783 aa)
Cops7b-2LOW QUALITY PROTEIN: COP9 signalosome complex subunit 7b. (69 aa)
Rps27aubiquitin-40S ribosomal protein S27a. (156 aa)
Upk3blUroplakin-3b-like protein. (276 aa)
Usp7Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (496 aa)
Ercc6DNA excision repair protein ERCC-6. (1236 aa)
LOC101823019Ubiquitin-like. (114 aa)
Cops7bCOP9 signalosome complex subunit 7b. (227 aa)
Isy1pre-mRNA-splicing factor ISY1 homolog. (285 aa)
ENSMAUP00000007258annotation not available (117 aa)
Gtf2h1General transcription factor IIH subunit 1. (236 aa)
TceancTranscription elongation factor A N-terminal and central domain-containing protein. (359 aa)
Hmgn1Non-histone chromosomal protein HMG-14. (97 aa)
ENSMAUP00000008237annotation not available (79 aa)
Polr2eDNA-directed RNA polymerases I, II, and III subunit RPABC1. (216 aa)
Polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
LOC101840076DNA-directed RNA polymerase II subunit RPB1. (543 aa)
Gtf2h2General transcription factor IIH subunit. (194 aa)
Rbx1E3 ubiquitin-protein ligase RBX1. (108 aa)
ENSMAUP00000009986annotation not available (173 aa)
Zfp830Zinc finger protein 830. (361 aa)
Tcea2Transcription elongation factor A protein 2 isoform X4. (299 aa)
Prpf19pre-mRNA-processing factor 19 isoform X1. (523 aa)
Ddb1DNA damage-binding protein 1 isoform X2. (1140 aa)
Gtf2h3General transcription factor IIH subunit 3. (309 aa)
Polr2jDNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
Polr2gDNA-directed RNA polymerase II subunit RPB7. (94 aa)
XpaDNA repair protein complementing XP-A cells isoform X2. (271 aa)
Cops5COP9 signalosome complex subunit 5. (321 aa)
Cdk7Cyclin dependent kinase 7. (224 aa)
Polr2dDNA-directed RNA polymerase II subunit RPB4. (142 aa)
Cops7aCOP9 signalosome complex subunit 7a. (277 aa)
Cops6COP9 signalosome complex subunit 6. (322 aa)
Ercc8DNA excision repair protein ERCC-8 isoform X1. (397 aa)
Gps1COP9 signalosome complex subunit 1 isoform X3. (526 aa)
ENSMAUP00000016955annotation not available (61 aa)
Polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Xab2pre-mRNA-splicing factor SYF1. (855 aa)
Cops8COP9 signalosome complex subunit 8. (209 aa)
Tcea1Transcription elongation factor A protein 1. (300 aa)
Hmgn2Non-histone chromosomal protein HMG-17. (90 aa)
Cops3COP9 signalosome complex subunit 3 isoform X2. (423 aa)
Ccnhcyclin-H; Belongs to the cyclin family. (324 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1175 aa)
ENSMAUP00000019431annotation not available (150 aa)
UvssaUV-stimulated scaffold protein A. (706 aa)
Polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X2. (127 aa)
Nrde2Protein NRDE2 homolog. (1167 aa)
Tcea3Transcription elongation factor A protein 3. (348 aa)
Mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (228 aa)
Polr2lDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
ENSMAUP00000021238annotation not available (247 aa)
ENSMAUP00000022314annotation not available (101 aa)
PpiePeptidyl-prolyl cis-trans isomerase E. (169 aa)
Tceanc2Transcription elongation factor A N-terminal and central domain-containing protein 2. (208 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (987 aa)
AqrRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1298 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
Gtf2h5General transcription factor IIH subunit 5. (71 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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