STRINGSTRING
Wdr25 Wdr25 Rbm22 Rbm22 Ubl5 Ubl5 Polr2i Polr2i Wbp11 Wbp11 Snrpe Snrpe LOC101832437 LOC101832437 Polr2c Polr2c Hnrnpc Hnrnpc ENSMAUP00000000889 ENSMAUP00000000889 Ptbp3 Ptbp3 Ctnnbl1 Ctnnbl1 Sf3b6 Sf3b6 Ppwd1 Ppwd1 Acin1 Acin1 Snrnp25 Snrnp25 ENSMAUP00000000106 ENSMAUP00000000106 ENSMAUP00000000065 ENSMAUP00000000065 Snrpn Snrpn Srsf7 Srsf7 ENSMAUP00000019072 ENSMAUP00000019072 Hnrnpm Hnrnpm Srrm3 Srrm3 Nsrp1 Nsrp1 Polr2b Polr2b Txnl4a-2 Txnl4a-2 ENSMAUP00000019450 ENSMAUP00000019450 Rbm25-2 Rbm25-2 Srsf12 Srsf12 Rbm7 Rbm7 Prpf4 Prpf4 LOC101834723 LOC101834723 Luc7l Luc7l Wbp4 Wbp4 LOC106022781 LOC106022781 Dnajc8 Dnajc8 Hnrnpa0 Hnrnpa0 Puf60-2 Puf60-2 Polr2f Polr2f Snrpd2 Snrpd2 Pcbp2 Pcbp2 Gtf2f2 Gtf2f2 Syf2 Syf2 Polr2l Polr2l Ptbp2 Ptbp2 ENSMAUP00000021238 ENSMAUP00000021238 Cdc40 Cdc40 ENSMAUP00000021312 ENSMAUP00000021312 Hnrnpa1 Hnrnpa1 Rbmx2 Rbmx2 Lrrc51 Lrrc51 Rbm17 Rbm17 C330007P06Rik C330007P06Rik ENSMAUP00000021666 ENSMAUP00000021666 Sde2 Sde2 Srsf10 Srsf10 Rbmx Rbmx Yju2 Yju2 Snrpf Snrpf Prcc Prcc Dhx8 Dhx8 Tprg1l Tprg1l Prpf40a Prpf40a Daw1 Daw1 ENSMAUP00000022912 ENSMAUP00000022912 Nkap Nkap ENSMAUP00000023020 ENSMAUP00000023020 Ppie Ppie Sf3a1 Sf3a1 Fam50a Fam50a Hnrnpul1 Hnrnpul1 Ppil3 Ppil3 Snrpg Snrpg Alyref Alyref Rbm5 Rbm5 Ncbp1 Ncbp1 ENSMAUP00000023527 ENSMAUP00000023527 Ppig Ppig ENSMAUP00000023663 ENSMAUP00000023663 Crnkl1 Crnkl1 Ddx42 Ddx42 Csdc2 Csdc2 ENSMAUP00000023791 ENSMAUP00000023791 ENSMAUP00000023853 ENSMAUP00000023853 Snrnp70 Snrnp70 Polr2a Polr2a Pcbp4 Pcbp4 Aqr Aqr Eftud2 Eftud2 Rbmxl2 Rbmxl2 Snrpd3 Snrpd3 Ncbp2 Ncbp2 Zmat5 Zmat5 CUNH9orf78 CUNH9orf78 Srsf1 Srsf1 Txnl4a Txnl4a Snrnp27 Snrnp27 Gcfc2 Gcfc2 ENSMAUP00000025369 ENSMAUP00000025369 Srsf4 Srsf4 Pnn Pnn Lsm2 Lsm2 Mfap1 Mfap1 Ybx2 Ybx2 Dqx1 Dqx1 Hnrnph3 Hnrnph3 Srsf2 Srsf2 LOC110340053 LOC110340053 ENSMAUP00000012407 ENSMAUP00000012407 Cwc27 Cwc27 ENSMAUP00000012642 ENSMAUP00000012642 Eif4a3 Eif4a3 Hnrnph1 Hnrnph1 Polr2j Polr2j Polr2g Polr2g Pqbp1 Pqbp1 Cdc5l Cdc5l Hnrnpul2 Hnrnpul2 Dhx34 Dhx34 Hnrnpr Hnrnpr Sf3b3 Sf3b3 Prkrip1 Prkrip1 ENSMAUP00000013721 ENSMAUP00000013721 Smu1 Smu1 Cwf19l2 Cwf19l2 Bcas2 Bcas2 Sf3a3 Sf3a3 Prpf6 Prpf6 Sf1 Sf1 ENSMAUP00000014248 ENSMAUP00000014248 Srrm2 Srrm2 Tprg Tprg Puf60 Puf60 Prpf8 Prpf8 Polr2d Polr2d Rbm6 Rbm6 ENSMAUP00000015601 ENSMAUP00000015601 Ppil4 Ppil4 Lrmda Lrmda Ralyl Ralyl Sf3b4 Sf3b4 Hnrnpk Hnrnpk Snrpa1 Snrpa1 Gtf2f1-2 Gtf2f1-2 LOC101842483 LOC101842483 Hnrnpa3 Hnrnpa3 Rbm25 Rbm25 ENSMAUP00000016648 ENSMAUP00000016648 Srrm1 Srrm1 Cherp Cherp Hnrnpll Hnrnpll Snip1 Snip1 Magoh Magoh Snrnp40 Snrnp40 Zfp318 Zfp318 Tfip11 Tfip11 Cwc22 Cwc22 Ppih Ppih Sart1 Sart1 Paxbp1 Paxbp1 Polr2h Polr2h Bud31 Bud31 Rbm41 Rbm41 LOC101831029 LOC101831029 Rbm3 Rbm3 ENSMAUP00000017692 ENSMAUP00000017692 LOC101831556 LOC101831556 Xab2 Xab2 Zmat2 Zmat2 Luc7l3 Luc7l3 LOC101831331 LOC101831331 Sugp1 Sugp1 Ybx1 Ybx1 Slu7 Slu7 Rbm8a Rbm8a ENSMAUP00000018274 ENSMAUP00000018274 Snw1 Snw1 Sf3b2 Sf3b2 Prpf3 Prpf3 Phf5a Phf5a U2af1l4 U2af1l4 ENSMAUP00000012377 ENSMAUP00000012377 Prpf19 Prpf19 Ppil2 Ppil2 Luc7l2 Luc7l2 Prr3 Prr3 Ddx23 Ddx23 Smndc1 Smndc1 Ybx3 Ybx3 Zfp830 Zfp830 Snrnp48 Snrnp48 Snrnp200 Snrnp200 Nkapl Nkapl Ik Ik Cwc15 Cwc15 Cactin Cactin Rbm10 Rbm10 Prpf31 Prpf31 Dhx15 Dhx15 Srsf3 Srsf3 ENSMAUP00000010589 ENSMAUP00000010589 Srsf9 Srsf9 Srrt Srrt Sugp2 Sugp2 Rbm42 Rbm42 ENSMAUP00000010327 ENSMAUP00000010327 Dhx33 Dhx33 ENSMAUP00000009986 ENSMAUP00000009986 Mtrex Mtrex LOC101840076 LOC101840076 ENSMAUP00000009002 ENSMAUP00000009002 Polr2k Polr2k Pdcd7 Pdcd7 Polr2e Polr2e Srek1 Srek1 Pcbp1 Pcbp1 ENSMAUP00000008380 ENSMAUP00000008380 Ppp1r8 Ppp1r8 Zrsr2 Zrsr2 Fus Fus ENSMAUP00000008075 ENSMAUP00000008075 Srsf5 Srsf5 ENSMAUP00000007994 ENSMAUP00000007994 Usp39 Usp39 Leng1 Leng1 U2surp U2surp Zcrb1 Zcrb1 Cwc25 Cwc25 Sf3b1 Sf3b1 Fam32a Fam32a Gtf2f1 Gtf2f1 Ccdc12 Ccdc12 Hnrnpu Hnrnpu Srsf11 Srsf11 Hnrnpd Hnrnpd LOC101844346 LOC101844346 Isy1 Isy1 Snrpa Snrpa Upf3b Upf3b Ddx5 Ddx5 Hnrnpl Hnrnpl ENSMAUP00000006800 ENSMAUP00000006800 Bud13 Bud13 Ppil1 Ppil1 Ptbp1 Ptbp1 Carhsp1 Carhsp1 Sf3b5 Sf3b5 Nol8 Nol8 ENSMAUP00000006105 ENSMAUP00000006105 Ddx41 Ddx41 Ddx39b Ddx39b Syncrip Syncrip Upk3bl Upk3bl Wdr70 Wdr70 Hnrnpf Hnrnpf ENSMAUP00000005745 ENSMAUP00000005745 Prpf4b Prpf4b Htatsf1 Htatsf1 Magohb Magohb Pcbp3 Pcbp3 Snrpd1 Snrpd1 Lin28b Lin28b ENSMAUP00000004820 ENSMAUP00000004820 Dhx38 Dhx38 Parpbp Parpbp Snrpb2 Snrpb2 Casc3 Casc3 Hnrnpa2b1 Hnrnpa2b1 Raly Raly Sf3a2 Sf3a2 ENSMAUP00000004316 ENSMAUP00000004316 Sap18 Sap18 Txnl4b Txnl4b ENSMAUP00000004100 ENSMAUP00000004100 Dhx35 Dhx35 Rnps1 Rnps1 Spaca6 Spaca6 Slirp Slirp ENSMAUP00000003314 ENSMAUP00000003314 Ddx46 Ddx46 Dhx32 Dhx32 Plrg1 Plrg1 Tra2b Tra2b LOC101835567 LOC101835567 Cirbp Cirbp Rbm7-2 Rbm7-2 Hnrnph2 Hnrnph2 Dhx16 Dhx16 Snrnp35 Snrnp35 ENSMAUP00000002107 ENSMAUP00000002107 Tm6sf2 Tm6sf2 Fam50b Fam50b Rnpc3 Rnpc3 Tcerg1 Tcerg1 ENSMAUP00000001644 ENSMAUP00000001644
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Wdr25WD repeat-containing protein 25. (534 aa)
Rbm22pre-mRNA-splicing factor RBM22. (420 aa)
Ubl5Ubiquitin-like protein 5. (73 aa)
Polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
Wbp11WW domain-binding protein 11. (639 aa)
SnrpeSmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (48 aa)
LOC101832437RNA-binding protein with serine-rich domain 1. (148 aa)
Polr2cDNA-directed RNA polymerase II subunit RPB3. (250 aa)
HnrnpcHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (314 aa)
ENSMAUP00000000889annotation not available (148 aa)
Ptbp3Polypyrimidine tract-binding protein 3. (524 aa)
Ctnnbl1Beta-catenin-like protein 1 isoform X2. (563 aa)
Sf3b6Splicing factor 3B subunit 6. (125 aa)
Ppwd1Peptidylprolyl isomerase domain and WD repeat-containing protein 1. (646 aa)
Acin1Apoptotic chromatin condensation inducer 1. (831 aa)
Snrnp25U11/U12 small nuclear ribonucleoprotein 25 kDa protein. (122 aa)
ENSMAUP00000000106annotation not available (289 aa)
ENSMAUP00000000065annotation not available (257 aa)
SnrpnSmall nuclear ribonucleoprotein-associated protein. (240 aa)
Srsf7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
ENSMAUP00000019072annotation not available (157 aa)
HnrnpmHeterogeneous nuclear ribonucleoprotein M isoform X1. (730 aa)
Srrm3Serine/arginine repetitive matrix protein 3. (647 aa)
Nsrp1Nuclear speckle splicing regulatory protein 1 isoform X1. (78 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1175 aa)
Txnl4a-2Thioredoxin-like protein 4A isoform X3. (63 aa)
ENSMAUP00000019450annotation not available (83 aa)
Rbm25-2RNA-binding protein 25. (372 aa)
Srsf12Serine/arginine-rich splicing factor 12. (253 aa)
Rbm7RNA binding motif protein 7. (155 aa)
Prpf4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
LOC101834723pre-mRNA-splicing factor 38A. (263 aa)
Luc7lPutative RNA-binding protein Luc7-like 1. (69 aa)
Wbp4WW domain-binding protein 4. (376 aa)
LOC106022781ATP-dependent RNA helicase DDX42-like. (139 aa)
Dnajc8dnaJ homolog subfamily C member 8. (223 aa)
Hnrnpa0LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A0. (302 aa)
Puf60-2poly(U)-binding-splicing factor PUF60 isoform X4. (470 aa)
Polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X2. (127 aa)
Snrpd2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
Pcbp2poly(RC)-binding protein 2. (339 aa)
Gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
Syf2pre-mRNA-splicing factor SYF2 isoform X1. (242 aa)
Polr2lDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
Ptbp2Polypyrimidine tract-binding protein 2 isoform X3. (532 aa)
ENSMAUP00000021238annotation not available (247 aa)
Cdc40pre-mRNA-processing factor 17. (579 aa)
ENSMAUP00000021312annotation not available (135 aa)
Hnrnpa1Heterogeneous nuclear ribonucleoprotein A1 isoform X2. (320 aa)
Rbmx2RNA-binding motif protein, X-linked 2. (333 aa)
Lrrc51Leucine-rich repeat-containing protein 51. (192 aa)
Rbm17Splicing factor 45. (405 aa)
C330007P06RikUPF0428 protein CXorf56 homolog. (175 aa)
ENSMAUP00000021666annotation not available (60 aa)
Sde2Protein SDE2 homolog. (444 aa)
Srsf10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
RbmxRNA-binding motif protein, X chromosome isoform X1. (391 aa)
Yju2Coiled-coil domain-containing protein 94. (326 aa)
SnrpfSmall nuclear ribonucleoprotein polypeptide F. (74 aa)
PrccProline-rich protein PRCC. (489 aa)
Dhx8ATP-dependent RNA helicase DHX8. (309 aa)
Tprg1lTumor protein p63-regulated gene 1-like protein. (266 aa)
Prpf40apre-mRNA-processing factor 40 homolog A isoform X2. (953 aa)
Daw1Dynein assembly factor with WDR repeat domains 1. (415 aa)
ENSMAUP00000022912annotation not available (508 aa)
NkapNF-kappa-B-activating protein. (335 aa)
ENSMAUP00000023020annotation not available (90 aa)
PpiePeptidyl-prolyl cis-trans isomerase E. (169 aa)
Sf3a1Splicing factor 3A subunit 1 isoform X2. (758 aa)
Fam50aProtein FAM50A. (283 aa)
Hnrnpul1Heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X3. (860 aa)
Ppil3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (97 aa)
SnrpgSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
AlyrefTHO complex subunit 4. (242 aa)
Rbm5RNA-binding protein 5 isoform X1. (828 aa)
Ncbp1Nuclear cap-binding protein subunit 1. (789 aa)
ENSMAUP00000023527annotation not available (78 aa)
PpigPeptidyl-prolyl cis-trans isomerase G. (702 aa)
ENSMAUP00000023663annotation not available (178 aa)
Crnkl1Crooked neck-like protein 1. (690 aa)
Ddx42ATP-dependent RNA helicase DDX42. (747 aa)
Csdc2Cold shock domain-containing protein C2. (152 aa)
ENSMAUP00000023791annotation not available (214 aa)
ENSMAUP00000023853annotation not available (267 aa)
Snrnp70U1 small nuclear ribonucleoprotein 70 kDa. (444 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (987 aa)
Pcbp4poly(RC)-binding protein 4 isoform X1. (404 aa)
AqrRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1298 aa)
Eftud2116 kDa U5 small nuclear ribonucleoprotein component isoform X1. (972 aa)
Rbmxl2RNA-binding motif protein, X-linked-like-2. (313 aa)
Snrpd3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
Ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
Zmat5Zinc finger matrin-type protein 5. (170 aa)
CUNH9orf78Uncharacterized protein C9orf78 homolog. (289 aa)
Srsf1Serine/arginine-rich splicing factor 1. (253 aa)
Txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
Snrnp27U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (155 aa)
Gcfc2GC-rich sequence DNA-binding factor 2 isoform X1. (772 aa)
ENSMAUP00000025369annotation not available (201 aa)
Srsf4Serine/arginine-rich splicing factor 4. (490 aa)
PnnPinin. (722 aa)
Lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
Mfap1Microfibrillar-associated protein 1. (439 aa)
Ybx2Y-box-binding protein 2. (359 aa)
Dqx1ATP-dependent RNA helicase DQX1 isoform X1. (710 aa)
Hnrnph3Heterogeneous nuclear ribonucleoprotein H3 isoform X2. (346 aa)
Srsf2Serine/arginine-rich splicing factor 2. (221 aa)
LOC110340053Cell division cycle and apoptosis regulator protein 1. (110 aa)
ENSMAUP00000012407annotation not available (102 aa)
Cwc27Peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X2. (471 aa)
ENSMAUP00000012642annotation not available (786 aa)
Eif4a3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
Hnrnph1Heterogeneous nuclear ribonucleoprotein H isoform X1. (472 aa)
Polr2jDNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
Polr2gDNA-directed RNA polymerase II subunit RPB7. (94 aa)
Pqbp1Polyglutamine-binding protein 1. (100 aa)
Cdc5lCell division cycle 5-like protein. (802 aa)
Hnrnpul2Heterogeneous nuclear ribonucleoprotein U-like protein 2 isoform X1. (747 aa)
Dhx34Probable ATP-dependent RNA helicase DHX34. (1144 aa)
HnrnprHeterogeneous nuclear ribonucleoprotein R isoform X2. (633 aa)
Sf3b3Splicing factor 3b subunit 3. (906 aa)
Prkrip1PRKR-interacting protein 1. (185 aa)
ENSMAUP00000013721annotation not available (98 aa)
Smu1WD40 repeat-containing protein SMU1. (513 aa)
Cwf19l2CWF19 like cell cycle control factor 2. (797 aa)
Bcas2pre-mRNA-splicing factor SPF27 isoform X1. (225 aa)
Sf3a3Splicing factor 3A subunit 3. (317 aa)
Prpf6pre-mRNA-processing factor 6. (941 aa)
Sf1Splicing factor 1 isoform X9. (638 aa)
ENSMAUP00000014248annotation not available (118 aa)
Srrm2Serine/arginine repetitive matrix protein 2 isoform X1. (2694 aa)
TprgTumor protein p63-regulated gene 1 protein. (174 aa)
Puf60poly(U)-binding-splicing factor PUF60 isoform X1. (408 aa)
Prpf8pre-mRNA-processing-splicing factor 8. (322 aa)
Polr2dDNA-directed RNA polymerase II subunit RPB4. (142 aa)
Rbm6RNA-binding protein 6. (464 aa)
ENSMAUP00000015601annotation not available (310 aa)
Ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (492 aa)
LrmdaLeucine-rich repeat-containing protein C10orf11 homolog isoform X3. (228 aa)
RalylRNA-binding Raly-like protein. (293 aa)
Sf3b4Splicing factor 3B subunit 4. (424 aa)
HnrnpkHeterogeneous nuclear ribonucleoprotein K. (484 aa)
Snrpa1U2 small nuclear ribonucleoprotein A' isoform X1. (255 aa)
Gtf2f1-2Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (242 aa)
LOC101842483U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (85 aa)
Hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (353 aa)
Rbm25RNA binding motif protein 25. (84 aa)
ENSMAUP00000016648annotation not available (95 aa)
Srrm1Serine/arginine repetitive matrix protein 1 isoform X1. (932 aa)
CherpCalcium homeostasis endoplasmic reticulum protein isoform X1. (939 aa)
HnrnpllHeterogeneous nuclear ribonucleoprotein L-like. (582 aa)
Snip1Smad nuclear-interacting protein 1. (387 aa)
MagohProtein mago nashi homolog. (146 aa)
Snrnp40U5 small nuclear ribonucleoprotein 40 kDa protein. (360 aa)
Zfp318Zinc finger protein 318. (2116 aa)
Tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)
Cwc22pre-mRNA-splicing factor CWC22 homolog. (757 aa)
PpihPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
Sart1U4/U6.U5 tri-snRNP-associated protein 1 isoform X1. (806 aa)
Paxbp1PAX3- and PAX7-binding protein 1. (810 aa)
Polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Bud31BUD31 homolog. (103 aa)
Rbm41RNA-binding protein 41 isoform X2. (437 aa)
LOC101831029Small nuclear ribonucleoprotein Sm D1-like. (111 aa)
Rbm3RNA-binding protein 3 isoform X1. (156 aa)
ENSMAUP00000017692annotation not available (308 aa)
LOC101831556Small nuclear ribonucleoprotein Sm D1-like. (111 aa)
Xab2pre-mRNA-splicing factor SYF1. (855 aa)
Zmat2Zinc finger matrin-type 2. (190 aa)
Luc7l3Luc7-like protein 3 isoform X1. (490 aa)
LOC101831331RNA binding motif protein, X-linked-like-1. (388 aa)
Sugp1SURP and G-patch domain-containing protein 1. (569 aa)
Ybx1Nuclease-sensitive element-binding protein 1. (303 aa)
Slu7pre-mRNA-splicing factor SLU7. (586 aa)
Rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
ENSMAUP00000018274annotation not available (74 aa)
Snw1SNW domain-containing protein 1. (536 aa)
Sf3b2Splicing factor 3B subunit 2. (556 aa)
Prpf3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
Phf5aPHD finger-like domain-containing protein 5A. (110 aa)
U2af1l4Splicing factor U2AF 26 kDa subunit. (220 aa)
ENSMAUP00000012377annotation not available (137 aa)
Prpf19pre-mRNA-processing factor 19 isoform X1. (523 aa)
Ppil2Peptidyl-prolyl cis-trans isomerase-like 2. (482 aa)
Luc7l2Putative RNA-binding protein Luc7-like 2. (316 aa)
Prr3Proline-rich protein 3 isoform X1. (194 aa)
Ddx23Probable ATP-dependent RNA helicase DDX23. (818 aa)
Smndc1Survival of motor neuron-related-splicing factor 30 isoform X1. (238 aa)
Ybx3Y-box-binding protein 3. (346 aa)
Zfp830Zinc finger protein 830. (361 aa)
Snrnp48U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (336 aa)
Snrnp200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
NkaplNKAP-like protein. (392 aa)
IkProtein Red isoform X1. (555 aa)
Cwc15Spliceosome-associated protein CWC15 homolog. (229 aa)
CactinCactin. (799 aa)
Rbm10RNA-binding protein 10 isoform X5. (931 aa)
Prpf31U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
Dhx15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1. (795 aa)
Srsf3Serine/arginine-rich splicing factor 3. (164 aa)
ENSMAUP00000010589annotation not available (151 aa)
Srsf9Serine/arginine-rich splicing factor 9. (221 aa)
SrrtSerrate RNA effector molecule homolog isoform X1. (875 aa)
Sugp2SURP and G-patch domain-containing protein 2 isoform X1. (1066 aa)
Rbm42RNA binding motif protein 42. (174 aa)
ENSMAUP00000010327annotation not available (476 aa)
Dhx33Putative ATP-dependent RNA helicase DHX33. (698 aa)
ENSMAUP00000009986annotation not available (173 aa)
MtrexSuperkiller viralicidic activity 2-like 2. (1041 aa)
LOC101840076DNA-directed RNA polymerase II subunit RPB1. (543 aa)
ENSMAUP00000009002annotation not available (76 aa)
Polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
Pdcd7Programmed cell death protein 7. (467 aa)
Polr2eDNA-directed RNA polymerases I, II, and III subunit RPABC1. (216 aa)
Srek1Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (611 aa)
Pcbp1poly(RC)-binding protein 1. (356 aa)
ENSMAUP00000008380annotation not available (68 aa)
Ppp1r8Nuclear inhibitor of protein phosphatase 1. (351 aa)
Zrsr2U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (508 aa)
FusRNA-binding protein FUS isoform X1. (517 aa)
ENSMAUP00000008075annotation not available (99 aa)
Srsf5Serine/arginine-rich splicing factor 5 isoform X1. (270 aa)
ENSMAUP00000007994annotation not available (170 aa)
Usp39U4/U6.U5 tri-snRNP-associated protein 2. (564 aa)
Leng1Leukocyte receptor cluster member 1. (260 aa)
U2surpU2 snRNP-associated SURP motif-containing protein. (425 aa)
Zcrb1Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (216 aa)
Cwc25pre-mRNA-splicing factor CWC25 homolog. (357 aa)
Sf3b1Splicing factor 3B subunit 1. (1264 aa)
Fam32aProtein FAM32A. (112 aa)
Gtf2f1General transcription factor IIF subunit 1. (280 aa)
Ccdc12Coiled-coil domain-containing protein 12. (166 aa)
HnrnpuHeterogeneous nuclear ribonucleoprotein U. (813 aa)
Srsf11Serine/arginine-rich splicing factor 11 isoform X1. (500 aa)
HnrnpdHeterogeneous nuclear ribonucleoprotein D0 isoform X1. (352 aa)
LOC101844346Small nuclear ribonucleoprotein F-like. (86 aa)
Isy1pre-mRNA-splicing factor ISY1 homolog. (285 aa)
SnrpaU1 small nuclear ribonucleoprotein A. (285 aa)
Upf3bRegulator of nonsense transcripts 3B isoform X1. (482 aa)
Ddx5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (615 aa)
HnrnplHeterogeneous nuclear ribonucleoprotein L isoform X2. (586 aa)
ENSMAUP00000006800annotation not available (133 aa)
Bud13BUD13 homolog isoform X3. (587 aa)
Ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
Ptbp1Polypyrimidine tract-binding protein 1. (545 aa)
Carhsp1Calcium-regulated heat-stable protein 1. (147 aa)
Sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
Nol8Nucleolar protein 8. (94 aa)
ENSMAUP00000006105annotation not available (189 aa)
Ddx41Probable ATP-dependent RNA helicase DDX41. (622 aa)
Ddx39bSpliceosome RNA helicase DDX39B. (428 aa)
SyncripSynaptotagmin binding cytoplasmic RNA interacting protein. (512 aa)
Upk3blUroplakin-3b-like protein. (276 aa)
Wdr70WD repeat-containing protein 70. (627 aa)
HnrnpfHeterogeneous nuclear ribonucleoprotein F. (415 aa)
ENSMAUP00000005745annotation not available (285 aa)
Prpf4bSerine/threonine-protein kinase PRP4 homolog. (1007 aa)
Htatsf1HIV Tat-specific factor 1. (746 aa)
MagohbProtein mago nashi homolog 2. (148 aa)
Pcbp3poly(RC)-binding protein 3 isoform X5. (371 aa)
Snrpd1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (153 aa)
Lin28bLin-28 homolog B (C. elegans). (182 aa)
ENSMAUP00000004820annotation not available (65 aa)
Dhx38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1046 aa)
ParpbpPCNA-interacting partner isoform X1. (573 aa)
Snrpb2U2 small nuclear ribonucleoprotein B'. (225 aa)
Casc3Protein CASC3. (624 aa)
Hnrnpa2b1Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1. (353 aa)
RalyRNA-binding protein Raly isoform X1. (211 aa)
Sf3a2Splicing factor 3A subunit 2. (194 aa)
ENSMAUP00000004316annotation not available (241 aa)
Sap18Histone deacetylase complex subunit SAP18. (129 aa)
Txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
ENSMAUP00000004100annotation not available (198 aa)
Dhx35Probable ATP-dependent RNA helicase DHX35. (668 aa)
Rnps1RNA-binding protein with serine-rich domain 1. (128 aa)
Spaca6Sperm acrosome membrane-associated protein 6. (339 aa)
SlirpSRA stem-loop-interacting RNA-binding protein, mitochondrial. (111 aa)
ENSMAUP00000003314annotation not available (266 aa)
Ddx46Probable ATP-dependent RNA helicase DDX46. (1022 aa)
Dhx32Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. (458 aa)
Plrg1Pleiotropic regulator 1. (514 aa)
Tra2bTransformer-2 protein homolog beta. (182 aa)
LOC101835567U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (105 aa)
CirbpCold-inducible RNA-binding protein isoform X2. (172 aa)
Rbm7-2RNA-binding protein 7. (265 aa)
Hnrnph2Heterogeneous nuclear ribonucleoprotein H2. (449 aa)
Dhx16Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1045 aa)
Snrnp35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (246 aa)
ENSMAUP00000002107annotation not available (148 aa)
Tm6sf2Transmembrane 6 superfamily member 2. (377 aa)
Fam50bProtein FAM50B. (335 aa)
Rnpc3RNA-binding protein 40. (514 aa)
Tcerg1Transcription elongation regulator 1 isoform X3. (1088 aa)
ENSMAUP00000001644annotation not available (227 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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