STRINGSTRING
Tnrc6c Tnrc6c Larp4b Larp4b Rbm12b Rbm12b Srsf1 Srsf1 ENSMAUP00000025369 ENSMAUP00000025369 Srsf4 Srsf4 Hnrnph3 Hnrnph3 Srsf2 Srsf2 ENSMAUP00000000106 ENSMAUP00000000106 Sf3b6 Sf3b6 Ptbp3 Ptbp3 Hnrnpc Hnrnpc Elavl1 Elavl1 Cstf2 Cstf2 Rbm22 Rbm22 LOC101826350 LOC101826350 Rnpc3 Rnpc3 Snrnp35 Snrnp35 Uhmk1 Uhmk1 Igf2bp3 Igf2bp3 Hnrnph2 Hnrnph2 Rbm7-2 Rbm7-2 Cirbp Cirbp Rbm28 Rbm28 Tra2b Tra2b Cpeb3 Cpeb3 Pabpc6 Pabpc6 Eif3g Eif3g Pabpc1 Pabpc1 ENSMAUP00000003314 ENSMAUP00000003314 Esrp2 Esrp2 Slirp Slirp Msi2 Msi2 Rnps1 Rnps1 ENSMAUP00000003614 ENSMAUP00000003614 Raver2 Raver2 LOC101829351 LOC101829351 ENSMAUP00000004100 ENSMAUP00000004100 Larp7 Larp7 Raly Raly Trmt2a Trmt2a Hnrnpa2b1 Hnrnpa2b1 Snrpb2 Snrpb2 Cstf2t Cstf2t Sfpq Sfpq Rbm47 Rbm47 Rbm15 Rbm15 Htatsf1 Htatsf1 Pabpn1 Pabpn1 A1cf A1cf Mthfsd Mthfsd Rbm27 Rbm27 Hnrnpf Hnrnpf Celf3 Celf3 Syncrip Syncrip G3bp2 G3bp2 ENSMAUP00000006105 ENSMAUP00000006105 Nol8 Nol8 U2af2 U2af2 Boll Boll Igf2bp2 Igf2bp2 Spen Spen Ptbp1 Ptbp1 Rbms1 Rbms1 Rbm11 Rbm11 ENSMAUP00000006800 ENSMAUP00000006800 Hnrnpl Hnrnpl G3bp1 G3bp1 Snrpa Snrpa Hnrnpd Hnrnpd Srsf11 Srsf11 LOC101833993 LOC101833993 Setd1a Setd1a Enox2 Enox2 Zcrb1 Zcrb1 U2surp U2surp Celf1 Celf1 Scaf8 Scaf8 Srsf5 Srsf5 Fus Fus Zrsr2 Zrsr2 Celf2 Celf2 ENSMAUP00000008380 ENSMAUP00000008380 Zfp638 Zfp638 Rbm46 Rbm46 Srek1 Srek1 Cpeb4 Cpeb4 Hnrnpdl Hnrnpdl ENSMAUP00000010327 ENSMAUP00000010327 Rbm24 Rbm24 Rbm42 Rbm42 Srsf9 Srsf9 ENSMAUP00000010589 ENSMAUP00000010589 Srsf3 Srsf3 Safb2 Safb2 Rbm10 Rbm10 Matr3 Matr3 Ppargc1a Ppargc1a Elavl2 Elavl2 Dazap1 Dazap1 Sart3 Sart3 Cpeb2 Cpeb2 Rbm20 Rbm20 Celf6 Celf6 ENSMAUP00000012377 ENSMAUP00000012377 Tnrc6a Tnrc6a Cpne1 Cpne1 Larp4 Larp4 Rbm43 Rbm43 Hnrnph1 Hnrnph1 Cpsf7 Cpsf7 Cpsf6 Cpsf6 Scaf4 Scaf4 Hnrnpr Hnrnpr Rbfox3 Rbfox3 Poldip3 Poldip3 ENSMAUP00000014169 ENSMAUP00000014169 Pabpn1l Pabpn1l Ppargc1b Ppargc1b Puf60 Puf60 Sltm Sltm Rbm39 Rbm39 ENSMAUP00000015601 ENSMAUP00000015601 Ppil4 Ppil4 Ralyl Ralyl Sf3b4 Sf3b4 Hnrnpa3 Hnrnpa3 Hnrnpll Hnrnpll Nono Nono Pabpc4l Pabpc4l Rbm41 Rbm41 Elavl3 Elavl3 Rbm3 Rbm3 ENSMAUP00000017692 ENSMAUP00000017692 Rbms3 Rbms3 LOC101831331 LOC101831331 Pprc1 Pprc1 Rbm8a Rbm8a Nelfe Nelfe Msi1 Msi1 Rbm45 Rbm45 Rbms2 Rbms2 Rbm4b Rbm4b Esrp1 Esrp1 Rbm33 Rbm33 U2af1l4 U2af1l4 Srsf7 Srsf7 Rbm14 Rbm14 Hnrnpm Hnrnpm Rbm26 Rbm26 Cpeb1 Cpeb1 Srsf12 Srsf12 Rbm7 Rbm7 Raver1 Raver1 Pabpc2 Pabpc2 Tardbp Tardbp Marf1 Marf1 Eif4b Eif4b Hnrnpa0 Hnrnpa0 Puf60-2 Puf60-2 Rdm1 Rdm1 Rbfox2 Rbfox2 Rbpms Rbpms Dazl Dazl Ptbp2 Ptbp2 ENSMAUP00000021312 ENSMAUP00000021312 Hnrnpa1 Hnrnpa1 Rbmx2 Rbmx2 Enox1 Enox1 Rbm17 Rbm17 Rbm19 Rbm19 Dnd1 Dnd1 Rbpms2 Rbpms2 Srsf10 Srsf10 Rbmx Rbmx Myef2 Myef2 Pabpc4 Pabpc4 Rrp7a Rrp7a ENSMAUP00000022912 ENSMAUP00000022912 Eif3b Eif3b Ppie Ppie Celf5 Celf5 Cnot4 Cnot4 U2af1 U2af1 Alyref Alyref Rbfox1 Rbfox1 Rbm5 Rbm5 Tia1 Tia1 ENSMAUP00000023853 ENSMAUP00000023853 Snrnp70 Snrnp70 Pspc1 Pspc1 Rbm38 Rbm38 Nifk Nifk Rbmxl2 Rbmxl2 Rbm18 Rbm18 Ncbp2 Ncbp2 Elavl4 Elavl4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tnrc6cTrinucleotide repeat-containing gene 6C protein isoform X3. (1690 aa)
Larp4bLa-related protein 4B isoform X2. (741 aa)
Rbm12bRNA-binding protein 12B. (840 aa)
Srsf1Serine/arginine-rich splicing factor 1. (253 aa)
ENSMAUP00000025369annotation not available (201 aa)
Srsf4Serine/arginine-rich splicing factor 4. (490 aa)
Hnrnph3Heterogeneous nuclear ribonucleoprotein H3 isoform X2. (346 aa)
Srsf2Serine/arginine-rich splicing factor 2. (221 aa)
ENSMAUP00000000106annotation not available (289 aa)
Sf3b6Splicing factor 3B subunit 6. (125 aa)
Ptbp3Polypyrimidine tract-binding protein 3. (524 aa)
HnrnpcHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (314 aa)
Elavl1ELAV-like protein; Belongs to the RRM elav family. (326 aa)
Cstf2Cleavage stimulation factor subunit 2 isoform X3. (580 aa)
Rbm22pre-mRNA-splicing factor RBM22. (420 aa)
LOC101826350Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (212 aa)
Rnpc3RNA-binding protein 40. (514 aa)
Snrnp35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (246 aa)
Uhmk1Serine/threonine-protein kinase Kist. (419 aa)
Igf2bp3Insulin-like growth factor 2 mRNA-binding protein 3 isoform X1. (579 aa)
Hnrnph2Heterogeneous nuclear ribonucleoprotein H2. (449 aa)
Rbm7-2RNA-binding protein 7. (265 aa)
CirbpCold-inducible RNA-binding protein isoform X2. (172 aa)
Rbm28RNA-binding protein 28. (771 aa)
Tra2bTransformer-2 protein homolog beta. (182 aa)
Cpeb3Cytoplasmic polyadenylation element-binding protein 3 isoform X1. (720 aa)
Pabpc6poly(A) binding protein, cytoplasmic 6. (638 aa)
Eif3gEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (320 aa)
Pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (623 aa)
ENSMAUP00000003314annotation not available (266 aa)
Esrp2Epithelial splicing regulatory protein 2 isoform X1. (717 aa)
SlirpSRA stem-loop-interacting RNA-binding protein, mitochondrial. (111 aa)
Msi2RNA-binding protein Musashi homolog 2 isoform X3. (347 aa)
Rnps1RNA-binding protein with serine-rich domain 1. (128 aa)
ENSMAUP00000003614annotation not available (170 aa)
Raver2Ribonucleoprotein PTB-binding 2. (673 aa)
LOC101829351RNA-binding protein EWS. (643 aa)
ENSMAUP00000004100annotation not available (198 aa)
Larp7La-related protein 7. (497 aa)
RalyRNA-binding protein Raly isoform X1. (211 aa)
Trmt2atRNA (Uracil-5-)-methyltransferase homolog A isoform X2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (612 aa)
Hnrnpa2b1Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1. (353 aa)
Snrpb2U2 small nuclear ribonucleoprotein B'. (225 aa)
Cstf2tCleavage stimulation factor subunit 2 tau variant. (622 aa)
SfpqSplicing factor, proline- and glutamine-rich. (703 aa)
Rbm47RNA-binding protein 47 isoform X1. (592 aa)
Rbm15Putative RNA-binding protein 15. (961 aa)
Htatsf1HIV Tat-specific factor 1. (746 aa)
Pabpn1Polyadenylate-binding protein 2. (333 aa)
A1cfAPOBEC1 complementation factor isoform X1. (595 aa)
MthfsdLOW QUALITY PROTEIN: methenyltetrahydrofolate synthase domain-containing protein. (359 aa)
Rbm27RNA-binding protein 27 isoform X2. (1004 aa)
HnrnpfHeterogeneous nuclear ribonucleoprotein F. (415 aa)
Celf3CUGBP Elav-like family member 3 isoform X1. (462 aa)
SyncripSynaptotagmin binding cytoplasmic RNA interacting protein. (512 aa)
G3bp2Ras GTPase-activating protein-binding protein 2 isoform X1. (482 aa)
ENSMAUP00000006105annotation not available (189 aa)
Nol8Nucleolar protein 8. (94 aa)
U2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (468 aa)
BollProtein boule-like. (293 aa)
Igf2bp2Insulin-like growth factor 2 mRNA-binding protein 2 isoform X1. (592 aa)
SpenMsx2-interacting protein isoform X1. (3539 aa)
Ptbp1Polypyrimidine tract-binding protein 1. (545 aa)
Rbms1RNA-binding motif, single-stranded-interacting protein 1 isoform X7. (417 aa)
Rbm11Splicing regulator RBM11. (238 aa)
ENSMAUP00000006800annotation not available (133 aa)
HnrnplHeterogeneous nuclear ribonucleoprotein L isoform X2. (586 aa)
G3bp1Ras GTPase-activating protein-binding protein 1. (465 aa)
SnrpaU1 small nuclear ribonucleoprotein A. (285 aa)
HnrnpdHeterogeneous nuclear ribonucleoprotein D0 isoform X1. (352 aa)
Srsf11Serine/arginine-rich splicing factor 11 isoform X1. (500 aa)
LOC101833993Nucleolysin TIAR. (235 aa)
Setd1aHistone-lysine N-methyltransferase SETD1A isoform X1. (1727 aa)
Enox2ecto-NOX disulfide-thiol exchanger 2 isoform X2. (582 aa)
Zcrb1Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (216 aa)
U2surpU2 snRNP-associated SURP motif-containing protein. (425 aa)
Celf1CUGBP Elav-like family member 1 isoform X6. (513 aa)
Scaf8Protein SCAF8. (1259 aa)
Srsf5Serine/arginine-rich splicing factor 5 isoform X1. (270 aa)
FusRNA-binding protein FUS isoform X1. (517 aa)
Zrsr2U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (508 aa)
Celf2CUGBP Elav-like family member 2 isoform X2. (451 aa)
ENSMAUP00000008380annotation not available (68 aa)
Zfp638Zinc finger protein 638 isoform X5. (1922 aa)
Rbm46Probable RNA-binding protein 46. (533 aa)
Srek1Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (611 aa)
Cpeb4Cytoplasmic polyadenylation element-binding protein 4 isoform X1. (729 aa)
HnrnpdlHeterogeneous nuclear ribonucleoprotein D-like isoform X1. (421 aa)
ENSMAUP00000010327annotation not available (476 aa)
Rbm24RNA-binding protein 24 isoform X1. (236 aa)
Rbm42RNA binding motif protein 42. (174 aa)
Srsf9Serine/arginine-rich splicing factor 9. (221 aa)
ENSMAUP00000010589annotation not available (151 aa)
Srsf3Serine/arginine-rich splicing factor 3. (164 aa)
Safb2Scaffold attachment factor B2. (805 aa)
Rbm10RNA-binding protein 10 isoform X5. (931 aa)
Matr3Matrin-3 isoform X1. (846 aa)
Ppargc1aPeroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1. (796 aa)
Elavl2ELAV-like protein; Belongs to the RRM elav family. (389 aa)
Dazap1DAZ-associated protein 1 isoform X2. (406 aa)
Sart3Squamous cell carcinoma antigen recognized by T-cells 3 isoform X2. (955 aa)
Cpeb2Cytoplasmic polyadenylation element-binding protein 2 isoform X2. (588 aa)
Rbm20RNA-binding protein 20. (1144 aa)
Celf6CUGBP Elav-like family member 6 isoform X1. (481 aa)
ENSMAUP00000012377annotation not available (137 aa)
Tnrc6aTrinucleotide repeat-containing gene 6A protein isoform X2. (1899 aa)
Cpne1Copine-1 isoform X1. (997 aa)
Larp4La-related protein 4. (678 aa)
Rbm43RNA-binding protein 43. (353 aa)
Hnrnph1Heterogeneous nuclear ribonucleoprotein H isoform X1. (472 aa)
Cpsf7Cleavage and polyadenylation specificity factor subunit 7 isoform X1. (471 aa)
Cpsf6Cleavage and polyadenylation specificity factor subunit 6 isoform X2. (588 aa)
Scaf4Splicing factor, arginine/serine-rich 15 isoform X3. (1122 aa)
HnrnprHeterogeneous nuclear ribonucleoprotein R isoform X2. (633 aa)
Rbfox3RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (375 aa)
Poldip3Polymerase delta-interacting protein 3. (403 aa)
ENSMAUP00000014169annotation not available (217 aa)
Pabpn1lEmbryonic polyadenylate-binding protein 2 isoform X2. (269 aa)
Ppargc1bPeroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1. (1022 aa)
Puf60poly(U)-binding-splicing factor PUF60 isoform X1. (408 aa)
SltmSAFB-like transcription modulator isoform X1. (919 aa)
Rbm39RNA-binding protein 39. (505 aa)
ENSMAUP00000015601annotation not available (310 aa)
Ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (492 aa)
RalylRNA-binding Raly-like protein. (293 aa)
Sf3b4Splicing factor 3B subunit 4. (424 aa)
Hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (353 aa)
HnrnpllHeterogeneous nuclear ribonucleoprotein L-like. (582 aa)
Nononon-POU domain-containing octamer-binding protein. (474 aa)
Pabpc4lPolyadenylate-binding protein 4-like. (370 aa)
Rbm41RNA-binding protein 41 isoform X2. (437 aa)
Elavl3ELAV-like protein; Belongs to the RRM elav family. (364 aa)
Rbm3RNA-binding protein 3 isoform X1. (156 aa)
ENSMAUP00000017692annotation not available (308 aa)
Rbms3RNA-binding motif, single-stranded-interacting protein 3 isoform X9. (446 aa)
LOC101831331RNA binding motif protein, X-linked-like-1. (388 aa)
Pprc1Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X5. (1630 aa)
Rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
NelfeNegative elongation factor E isoform X2. (366 aa)
Msi1RNA-binding protein Musashi homolog 1. (243 aa)
Rbm45RNA-binding protein 45. (477 aa)
Rbms2RNA-binding motif, single-stranded-interacting protein 2. (247 aa)
Rbm4bRNA-binding protein 4B. (356 aa)
Esrp1Epithelial splicing regulatory protein 1 isoform X1. (667 aa)
Rbm33RNA-binding protein 33 isoform X1. (1227 aa)
U2af1l4Splicing factor U2AF 26 kDa subunit. (220 aa)
Srsf7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
Rbm14RNA-binding protein 14 isoform X1. (669 aa)
HnrnpmHeterogeneous nuclear ribonucleoprotein M isoform X1. (730 aa)
Rbm26RNA-binding protein 26 isoform X2. (1007 aa)
Cpeb1Cytoplasmic polyadenylation element-binding protein 1 isoform X2. (551 aa)
Srsf12Serine/arginine-rich splicing factor 12. (253 aa)
Rbm7RNA binding motif protein 7. (155 aa)
Raver1Ribonucleoprotein PTB-binding 1. (744 aa)
Pabpc2Polyadenylate-binding protein 1-like. (630 aa)
TardbpTAR DNA-binding protein 43 isoform X1. (414 aa)
Marf1LOW QUALITY PROTEIN: meiosis arrest female protein 1. (1675 aa)
Eif4bEukaryotic translation initiation factor 4B. (599 aa)
Hnrnpa0LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A0. (302 aa)
Puf60-2poly(U)-binding-splicing factor PUF60 isoform X4. (470 aa)
Rdm1RAD52 motif-containing protein 1 isoform X1. (280 aa)
Rbfox2RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (378 aa)
RbpmsRNA-binding protein with multiple splicing isoform X1. (220 aa)
DazlDeleted in azoospermia-like. (305 aa)
Ptbp2Polypyrimidine tract-binding protein 2 isoform X3. (532 aa)
ENSMAUP00000021312annotation not available (135 aa)
Hnrnpa1Heterogeneous nuclear ribonucleoprotein A1 isoform X2. (320 aa)
Rbmx2RNA-binding motif protein, X-linked 2. (333 aa)
Enox1ecto-NOX disulfide-thiol exchanger 1 isoform X1. (644 aa)
Rbm17Splicing factor 45. (405 aa)
Rbm19Probable RNA-binding protein 19. (951 aa)
Dnd1Dead end protein homolog 1 isoform X2. (352 aa)
Rbpms2RNA-binding protein with multiple splicing 2. (192 aa)
Srsf10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
RbmxRNA-binding motif protein, X chromosome isoform X1. (391 aa)
Myef2Myelin expression factor 2 isoform X1. (596 aa)
Pabpc4poly(A) binding protein cytoplasmic 4. (474 aa)
Rrp7aRibosomal RNA-processing protein 7 homolog A. (153 aa)
ENSMAUP00000022912annotation not available (508 aa)
Eif3bEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (800 aa)
PpiePeptidyl-prolyl cis-trans isomerase E. (169 aa)
Celf5CUGBP Elav-like family member 5 isoform X1. (395 aa)
Cnot4CCR4-NOT transcription complex subunit 4 isoform X2. (710 aa)
U2af1Splicing factor U2AF 35 kDa subunit isoform X1. (239 aa)
AlyrefTHO complex subunit 4. (242 aa)
Rbfox1RNA binding protein fox-1 homolog 1. (295 aa)
Rbm5RNA-binding protein 5 isoform X1. (828 aa)
Tia1Nucleolysin TIA-1 isoform X2. (387 aa)
ENSMAUP00000023853annotation not available (267 aa)
Snrnp70U1 small nuclear ribonucleoprotein 70 kDa. (444 aa)
Pspc1Paraspeckle component 1. (454 aa)
Rbm38RNA-binding protein 38. (237 aa)
NifkMKI67 FHA domain-interacting nucleolar phosphoprotein. (299 aa)
Rbmxl2RNA-binding motif protein, X-linked-like-2. (313 aa)
Rbm18Probable RNA-binding protein 18. (190 aa)
Ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
Elavl4ELAV-like protein; Belongs to the RRM elav family. (385 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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