STRINGSTRING
H2-Oa H2-Oa Snrpd3 Snrpd3 ENSMAUP00000024144 ENSMAUP00000024144 Trim58 Trim58 H2-Ab1 H2-Ab1 Cd28 Cd28 Cd40lg Cd40lg H3f3a H3f3a Ssb Ssb Cd80 Cd80 Cd86 Cd86 ENSMAUP00000021721 ENSMAUP00000021721 Ctsg Ctsg Fcgr4 Fcgr4 ENSMAUP00000020463 ENSMAUP00000020463 ENSMAUP00000020431 ENSMAUP00000020431 ENSMAUP00000020353 ENSMAUP00000020353 H1f3 H1f3 LOC101830217 LOC101830217 ENSMAUP00000020303 ENSMAUP00000020303 ENSMAUP00000020297 ENSMAUP00000020297 H1f4 H1f4 Mroh2b Mroh2b Nmd3 Nmd3 H2-DMa H2-DMa Actn4 Actn4 C1r C1r ENSMAUP00000001718 ENSMAUP00000001718 C8b C8b Trim11 Trim11 H2bc1 H2bc1 H2ac1 H2ac1 H2aj H2aj Abcf2 Abcf2 H2-Aa H2-Aa LOC101825458 LOC101825458 H2az2 H2az2 Tnf Tnf LOC101824849 LOC101824849 Prtn3 Prtn3 H2-Ea-ps H2-Ea-ps H3f3b H3f3b C4b C4b Macroh2a2 Macroh2a2 ENSMAUP00000017208 ENSMAUP00000017208 C1qb C1qb LOC101831029 LOC101831029 LOC101831556 LOC101831556 Macroh2a1 Macroh2a1 ENSMAUP00000018058 ENSMAUP00000018058 LOC106022591 LOC106022591 LOC101840877 LOC101840877 LOC101844254 LOC101844254 LOC101843996 LOC101843996 ENSMAUP00000004122 ENSMAUP00000004122 LOC101839356 LOC101839356 C1s C1s LOC101841418 LOC101841418 LOC101841682 LOC101841682 C8g C8g LOC106022595 LOC106022595 LOC101841148 LOC101841148 ENSMAUP00000019710 ENSMAUP00000019710 H1f1 H1f1 LOC101843733 LOC101843733 H2bc3 H2bc3 H1f2 H1f2 LOC101828345 LOC101828345 H1f6 H1f6 ENSMAUP00000020205 ENSMAUP00000020205 C9 C9 ENSMAUP00000020273 ENSMAUP00000020273 H2bc18 H2bc18 LOC101843531 LOC101843531 LOC101843803 LOC101843803 Snrpd1 Snrpd1 LOC101825928 LOC101825928 H2-Ob H2-Ob Ighm Ighm C6 C6 C1rl C1rl Ro60 Ro60 ENSMAUP00000007177 ENSMAUP00000007177 Il10 Il10 Grin2a Grin2a H2ax H2ax ENSMAUP00000008488 ENSMAUP00000008488 ENSMAUP00000008754 ENSMAUP00000008754 ENSMAUP00000008766 ENSMAUP00000008766 Grin2b Grin2b H2bu2 H2bu2 H2aw H2aw LOC101828432 LOC101828432 LOC101829234 LOC101829234 C1qc C1qc Elane Elane LOC101829406 LOC101829406 ENSMAUP00000011068 ENSMAUP00000011068 LOC110340247 LOC110340247 C8a C8a LOC101825376 LOC101825376 Cd40 Cd40 C1qa C1qa LOC106022112 LOC106022112 C3 C3 Ifng Ifng Trim21 Trim21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2-OaHLA class II histocompatibility antigen, DO alpha chain isoform X1; Belongs to the MHC class II family. (250 aa)
Snrpd3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
ENSMAUP00000024144annotation not available (159 aa)
Trim58E3 ubiquitin-protein ligase TRIM58. (486 aa)
H2-Ab1Rano class II histocompatibility antigen, A beta chain-like. (263 aa)
Cd28T-cell-specific surface glycoprotein CD28. (219 aa)
Cd40lgCD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. (260 aa)
H3f3aHistone H3.3. (136 aa)
SsbLupus La protein. (152 aa)
Cd80T-lymphocyte activation antigen CD80 isoform X1. (294 aa)
Cd86T-lymphocyte activation antigen CD86 precursor. (263 aa)
ENSMAUP00000021721annotation not available (153 aa)
CtsgCathepsin G-like; Belongs to the peptidase S1 family. (264 aa)
Fcgr4Low affinity immunoglobulin gamma Fc region receptor III-like precursor. (251 aa)
ENSMAUP00000020463annotation not available (168 aa)
ENSMAUP00000020431annotation not available (107 aa)
ENSMAUP00000020353annotation not available (103 aa)
H1f3Histone H1.3. (220 aa)
LOC101830217Histone H2B type 1. (126 aa)
ENSMAUP00000020303annotation not available (136 aa)
ENSMAUP00000020297annotation not available (117 aa)
H1f4Histone H1.4. (219 aa)
Mroh2bMaestro heat-like repeat-containing protein family member 2B. (1581 aa)
Nmd360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (503 aa)
H2-DMaClass II histocompatibility antigen, M alpha chain; Belongs to the MHC class II family. (261 aa)
Actn4Actinin alpha 4. (523 aa)
C1rComplement C1r subcomponent; Belongs to the peptidase S1 family. (705 aa)
ENSMAUP00000001718annotation not available (115 aa)
C8bComplement component C8 beta chain isoform X1. (588 aa)
Trim11E3 ubiquitin-protein ligase TRIM11 isoform X1. (467 aa)
H2bc1Histone H2B; Belongs to the histone H2B family. (127 aa)
H2ac1Histone H2A; Belongs to the histone H2A family. (130 aa)
H2ajHistone H2A; Belongs to the histone H2A family. (126 aa)
Abcf2ATP-binding cassette sub-family F member 2. (625 aa)
H2-AaH-2 class II histocompatibility antigen, A-U alpha chain. (173 aa)
LOC101825458Alpha-actinin-4. (692 aa)
H2az2Histone H2A; Belongs to the histone H2A family. (128 aa)
TnfTumor necrosis factor; Belongs to the tumor necrosis factor family. (233 aa)
LOC101824849Histone H2A; Belongs to the histone H2A family. (121 aa)
Prtn3Transmembrane protease serine 9. (254 aa)
H2-Ea-psH-2 class II histocompatibility antigen, E-U alpha chain; Belongs to the MHC class II family. (256 aa)
H3f3bHistone H3; Belongs to the histone H3 family. (136 aa)
C4bComplement C4 isoform X2. (1738 aa)
Macroh2a2Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
ENSMAUP00000017208annotation not available (174 aa)
C1qbComplement C1q subcomponent subunit B isoform X2. (254 aa)
LOC101831029Small nuclear ribonucleoprotein Sm D1-like. (111 aa)
LOC101831556Small nuclear ribonucleoprotein Sm D1-like. (111 aa)
Macroh2a1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
ENSMAUP00000018058annotation not available (76 aa)
LOC106022591Histone H4. (103 aa)
LOC101840877Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC101844254Histone H2B type 1. (126 aa)
LOC101843996Histone H2A; Belongs to the histone H2A family. (130 aa)
ENSMAUP00000004122annotation not available (116 aa)
LOC101839356Histone H2B; Belongs to the histone H2B family. (126 aa)
C1sCalcium-dependent serine proteinase heavy chain; Capable of degrading extracellular matrix proteins. CASP degrades type I and IV collagen and fibronectin in the presence of calcium; Belongs to the peptidase S1 family. (695 aa)
LOC101841418Histone H2A type 1-E. (130 aa)
LOC101841682Histone H2B type 1. (126 aa)
C8gComplement component C8 gamma chain isoform X1. (202 aa)
LOC106022595Histone H4. (103 aa)
LOC101841148Histone H2A type 1-E. (130 aa)
ENSMAUP00000019710annotation not available (70 aa)
H1f1Histone H1.1. (213 aa)
LOC101843733H-2 class II histocompatibility antigen, E-D beta chain-like. (181 aa)
H2bc3Histone H2B; Belongs to the histone H2B family. (126 aa)
H1f2Histone H1.2. (211 aa)
LOC101828345Histone H3-like. (136 aa)
H1f6Histone H1t. (208 aa)
ENSMAUP00000020205annotation not available (103 aa)
C9Complement component C9. (570 aa)
ENSMAUP00000020273annotation not available (126 aa)
H2bc18Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC101843531Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC101843803Histone H2B; Belongs to the histone H2B family. (126 aa)
Snrpd1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (153 aa)
LOC101825928Histone H4. (103 aa)
H2-ObHLA class II histocompatibility antigen, DO beta chain. (274 aa)
IghmIg mu chain C region. (454 aa)
C6Complement component C6. (732 aa)
C1rlLOW QUALITY PROTEIN: complement C1r subcomponent-like protein; Belongs to the peptidase S1 family. (485 aa)
Ro6060 kDa SS-A/Ro ribonucleoprotein. (538 aa)
ENSMAUP00000007177annotation not available (91 aa)
Il10Interleukin-10 isoform X1. (178 aa)
Grin2aGlutamate receptor ionotropic, NMDA 2A. (1464 aa)
H2axHistone H2A; Belongs to the histone H2A family. (143 aa)
ENSMAUP00000008488annotation not available (71 aa)
ENSMAUP00000008754annotation not available (103 aa)
ENSMAUP00000008766annotation not available (97 aa)
Grin2bGlutamate receptor ionotropic, NMDA 2B. (1483 aa)
H2bu2Histone H2B; Belongs to the histone H2B family. (126 aa)
H2awHistone H2A; Belongs to the histone H2A family. (130 aa)
LOC101828432Histone H3; Belongs to the histone H3 family. (136 aa)
LOC101829234Histone H2B; Belongs to the histone H2B family. (126 aa)
C1qcComplement C1q subcomponent subunit C. (245 aa)
ElaneNeutrophil elastase-like; Belongs to the peptidase S1 family. (265 aa)
LOC101829406Histone H4. (103 aa)
ENSMAUP00000011068annotation not available (105 aa)
LOC110340247LOW QUALITY PROTEIN: histone H3, embryonic-like. (135 aa)
C8aComplement component C8 alpha chain. (582 aa)
LOC101825376LOW QUALITY PROTEIN: uncharacterized protein LOC101825376. (136 aa)
Cd40Tumor necrosis factor receptor superfamily member 5 isoform X2. (290 aa)
C1qaComplement C1q subcomponent subunit A. (245 aa)
LOC106022112Histone H2A; Belongs to the histone H2A family. (64 aa)
C3Complement C3. (1483 aa)
IfngInterferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons (By similarity); Belongs to the type II (or gamma) interferon family. (174 aa)
Trim21E3 ubiquitin-protein ligase TRIM21. (467 aa)
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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