STRINGSTRING
CFU_0832 CFU_0832 CFU_0833 CFU_0833 acrA acrA tolC tolC CFU_1178 CFU_1178 CFU_1182 CFU_1182 mdtC mdtC CFU_1184 CFU_1184 CFU_1185 CFU_1185 CFU_1245 CFU_1245 hlyD3 hlyD3 CFU_1247 CFU_1247 CFU_1248 CFU_1248 CFU_1249 CFU_1249 CFU_1323 CFU_1323 CFU_1347 CFU_1347 mdoG mdoG mdoH mdoH opgD opgD CFU_1432 CFU_1432 CFU_1433 CFU_1433 CFU_1434 CFU_1434 czcB czcB czcA czcA nodT nodT CFU_1658 CFU_1658 CFU_1659 CFU_1659 emrB emrB emrA emrA CFU_1662 CFU_1662 CFU_1663 CFU_1663 CFU_1664 CFU_1664 hlyB hlyB CFU_1829 CFU_1829 hlyD hlyD tolC2 tolC2 CFU_2060 CFU_2060 CFU_2061 CFU_2061 CFU_2062 CFU_2062 ameR ameR CFU_2064 CFU_2064 CFU_2162 CFU_2162 CFU_2163 CFU_2163 CFU_2164 CFU_2164 CFU_2165 CFU_2165 CFU_2287 CFU_2287 CFU_2392 CFU_2392 fpr fpr CFU_2475 CFU_2475 CFU_2476 CFU_2476 emrA2 emrA2 emrB2 emrB2 czcA2 czcA2 czcB2 czcB2 czcC czcC CFU_2525 CFU_2525 CFU_2526 CFU_2526 CFU_2590 CFU_2590 CFU_2591 CFU_2591 CFU_2592 CFU_2592 CFU_2669 CFU_2669 frpC frpC CFU_2673 CFU_2673 cyaB cyaB CFU_2678 CFU_2678 CFU_2679 CFU_2679 CFU_2720 CFU_2720 CFU_2721 CFU_2721 CFU_2722 CFU_2722 macA macA macB macB CFU_3096 CFU_3096 cvaA cvaA cvaB cvaB CFU_3474 CFU_3474 CFU_3590 CFU_3590 CFU_3591 CFU_3591 CFU_3592 CFU_3592 cyaD cyaD CFU_3594 CFU_3594 amyH amyH CFU_3598 CFU_3598 CFU_3599 CFU_3599 CFU_3600 CFU_3600 acrB acrB hlyD2 hlyD2 CFU_3709 CFU_3709
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFU_0832Outer membrane protein of RND family multidrug efflux pump. (480 aa)
CFU_0833Inner membrane efflux transporter of RND family multidrug efflux pump. (1050 aa)
acrAMembrane fusion protein of RND family multidrug efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (468 aa)
tolCType I secretion outer membrane protein, precursor. (435 aa)
CFU_1178Putative multidrug efflux protein. (464 aa)
CFU_1182Outer membrane protein. (501 aa)
mdtCTransmembrane drug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1072 aa)
CFU_1184Hypothetical protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1052 aa)
CFU_1185Putative resistance transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (488 aa)
CFU_1245Hypothetical protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1049 aa)
hlyD3Secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (393 aa)
CFU_1247RND efflux system, outer membrane lipoprotein, NodT family. (516 aa)
CFU_1248Major facilitator superfamily. (470 aa)
CFU_1249Hypothetical protein. (59 aa)
CFU_1323Major facilitator superfamily (MFS) multidrug efflux pump. (470 aa)
CFU_1347Putative outer membrane adhesin like proteiin. (511 aa)
mdoGPeriplasmic glucan biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (523 aa)
mdoHGlucans biosynthesis glucosyltransferase H; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (857 aa)
opgDGlucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). Belongs to the OpgD/OpgG family. (531 aa)
CFU_1432Putative transport protein (ABC superfamily, ATP_bind). (623 aa)
CFU_1433Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (423 aa)
CFU_1434Outer membrane efflux protein. (480 aa)
czcBPutative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (380 aa)
czcACobalt-zinc-cadmium resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1031 aa)
nodTRND efflux system, outer membrane lipoprotein. (496 aa)
CFU_1658Hypothetical protein. (60 aa)
CFU_1659Putative transcription regulator protein. (148 aa)
emrBInner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily. (512 aa)
emrAMembrane fusion component of tripartite multidrug resistance system. (396 aa)
CFU_1662Outer membrane component of tripartite multidrug resistance system. (488 aa)
CFU_1663Transcriptional regulator, TetR family. (199 aa)
CFU_1664Phosphoesterase PHP, N-terminal. (276 aa)
hlyBPutative ABC transporter. (746 aa)
CFU_1829Calcium binding hemolysin protein, putative. (2795 aa)
hlyDType I secretion membrane fusion protein, HlyD. (459 aa)
tolC2Type I secretion outer membrane protein, TolC precursor. (453 aa)
CFU_2060Putative short-chain alcohol dehydrogenase. (119 aa)
CFU_2061RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1022 aa)
CFU_2062Putative transport lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (369 aa)
ameRTranscriptional regulator, TetR family. (207 aa)
CFU_2064Outer membrane protein. (455 aa)
CFU_2162Acriflavin resistance plasma membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1026 aa)
CFU_2163Hypothetical Protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (414 aa)
CFU_2164OprM. (487 aa)
CFU_2165Putative transcriptional regulatory protein, TetR/AcrR family. (211 aa)
CFU_2287Major facilitator superfamily MFS_1. (458 aa)
CFU_2392Major facilitator superfamily protein superfamily. (493 aa)
fprFerredoxin--NADP(+) reductase. (267 aa)
CFU_2475Transcriptional regulator, MarR family. (157 aa)
CFU_2476Outer membrane component of tripartite multidrug resistance system. (517 aa)
emrA2Membrane fusion component of tripartite multidrug resistance system. (405 aa)
emrB2Inner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily. (525 aa)
czcA2RND divalent metal cation efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1057 aa)
czcB2Putative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (526 aa)
czcCHeavy metal RND efflux outer membrane protein, CzcC family. (466 aa)
CFU_2525Hypothetical protein. (95 aa)
CFU_2526Hypothetical protein. (95 aa)
CFU_2590Cation/multidrug efflux system, mebrane-fusion component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (441 aa)
CFU_2591AcrB/AcrD/AcrF family protein. (1075 aa)
CFU_2592Outer membrane component of tripartite multidrug resistance system. (479 aa)
CFU_2669Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. (499 aa)
frpCPutative outer membrane adhesin like protein. (787 aa)
CFU_2673Putative HlyD family secretion protein. (480 aa)
cyaBHlyB/MsbA family ABC transporter. (720 aa)
CFU_2678Hypothetical protein. (104 aa)
CFU_2679Phage-related protein. (159 aa)
CFU_2720Radical SAM domain protein. (401 aa)
CFU_2721RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1027 aa)
CFU_2722Putative RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (420 aa)
macAMacrolide-specific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (398 aa)
macBMacrolide export ATP-binding/permease protein macB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (659 aa)
CFU_3096Outer membrane protein of RND family multidrug efflux pump. (501 aa)
cvaAPutative secretion protein. (425 aa)
cvaBToxin secretion ABC transporter, ATP-binding protein, putative. (730 aa)
CFU_3474Type I secretion outer membrane protein, TolC family; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. (473 aa)
CFU_3590Putative signal peptide protein. (216 aa)
CFU_3591Outer membrane efflux protein. (202 aa)
CFU_3592Outer membrane efflux protein. (710 aa)
cyaDType I secretion membrane fusion protein, HlyD family. (415 aa)
CFU_3594ABC transporter related protein. (740 aa)
amyHLarge repetitive protein. (510 aa)
CFU_3598Integral membrane protein. (414 aa)
CFU_3599Outer membrane protein A precursor. (318 aa)
CFU_3600Large repetitive protein. (2114 aa)
acrBAcriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1028 aa)
hlyD2Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (394 aa)
CFU_3709Outer membrane component of tripartite multidrug resistance system. (493 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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